4933431K23Rik Gene Detail

Summary

• Symbol
  4933431K23Rik
• Name
  RIKEN cDNA 4933431K23 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1921725
  NCBI Gene: 74475
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:78350795-78413208 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 36.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1855 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921725	lncRNA gene	Chr8:78337489-78496311 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015718	unclassified non-coding RNA gene	Chr8:78199021-78370553 (+)
A/J	MGP_AJ_G0015696	unclassified non-coding RNA gene	Chr8:75070384-75226492 (+)
AKR/J	MGP_AKRJ_G0015659	unclassified non-coding RNA gene	Chr8:77324937-77506385 (+)
BALB/cJ	MGP_BALBcJ_G0015657	unclassified non-coding RNA gene	Chr8:75184874-75346775 (+)
C3H/HeJ	MGP_C3HHeJ_G0015479	unclassified non-coding RNA gene	Chr8:77940424-78103419 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016112	unclassified non-coding RNA gene	Chr8:81199143-81381775 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013840	unclassified non-coding RNA gene	Chr8:69183211-69332466 (+)
CAST/EiJ	MGP_CASTEiJ_G0015034	unclassified non-coding RNA gene	Chr8:77250696-77439679 (+)
CBA/J	MGP_CBAJ_G0015460	unclassified non-coding RNA gene	Chr8:84075414-84271557 (+)
DBA/2J	MGP_DBA2J_G0015556	unclassified non-coding RNA gene	Chr8:74783937-74936642 (+)
FVB/NJ	MGP_FVBNJ_G0015562	unclassified non-coding RNA gene	Chr8:73778667-73931581 (+)
LP/J	MGP_LPJ_G0015636	unclassified non-coding RNA gene	Chr8:78259508-78434017 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015584	unclassified non-coding RNA gene	Chr8:86704179-86875010 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016154	unclassified non-coding RNA gene	Chr8:77336993-77499741 (+)
PWK/PhJ	MGP_PWKPhJ_G0014815	unclassified non-coding RNA gene	Chr8:74018522-74185437 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014604	unclassified non-coding RNA gene	Chr8:76172682-76348445 (+)
WSB/EiJ	MGP_WSBEiJ_G0015138	unclassified non-coding RNA gene	Chr8:77662946-77839027 (+)

Homology

• Gene Tree
  4933431K23Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 4933431K23Rik
• Find Mice (IMSR)
  6 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  1

• Ensembl
  ENSMUSG00000086451 (Evidence)
• NCBI Gene
  74475

Representative Sequences			Length	Strain/Species
genomic	74475	NCBI Gene Model | MGI Sequence Detail	62414	C57BL/6J
transcript	NR_170976	RefSeq | MGI Sequence Detail	1237	C57BL/6

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 2
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563