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4833427F10Rik Gene Detail
Summary
  • Symbol
    4833427F10Rik
  • Name
    RIKEN cDNA 4833427F10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921851
    NCBI Gene: 74601
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:36083342-36091579 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921851
 lncRNA gene Chr17:36083342-36091579 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005730
 lincRNA gene Chr17:35960453-35968493 (+)
A/J MGP_AJ_G0005718
 lincRNA gene Chr17:34849091-34857774 (+)
AKR/J MGP_AKRJ_G0005698
 lincRNA gene Chr17:35275015-35284177 (+)
BALB/cJ MGP_BALBcJ_G0005698
 lincRNA gene Chr17:34989463-34997957 (+)
C3H/HeJ MGP_C3HHeJ_G0005645
 lincRNA gene Chr17:35736758-35746017 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005855
 lincRNA gene Chr17:37433321-37441906 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005210
 lincRNA gene Chr17:32550371-32558421 (+)
CAST/EiJ MGP_CASTEiJ_G0005588
 lincRNA gene Chr17:35845166-35855616 (+)
CBA/J MGP_CBAJ_G0005633
 lincRNA gene Chr17:39014121-39022864 (+)
DBA/2J MGP_DBA2J_G0005651
 lincRNA gene Chr17:34158597-34167100 (+)
FVB/NJ MGP_FVBNJ_G0005677
 lincRNA gene Chr17:33954831-33963684 (+)
LP/J MGP_LPJ_G0005733
 lincRNA gene Chr17:36338364-36350514 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005663
 lincRNA gene Chr17:37777041-37785274 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005856
 lincRNA gene Chr17:35590538-35599475 (+)
PWK/PhJ MGP_PWKPhJ_G0005532
 lincRNA gene Chr17:33018877-33027176 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005452
 lincRNA gene Chr17:33636180-33649301 (+)
WSB/EiJ MGP_WSBEiJ_G0005640
 lincRNA gene Chr17:35740651-35748856 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 74601 NCBI Gene Model | MGI Sequence Detail 8238 C57BL/6J ±  kb
transcript NR_045459 RefSeq | MGI Sequence Detail 1475 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 9
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:223994 Zangrando J, et al., Identification of candidate long non-coding RNAs in response to myocardial infarction. BMC Genomics. 2014;15:460
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory