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S100pbp Gene Detail
Summary
  • Symbol
    S100pbp
  • Name
    S100P binding protein
  • Synonyms
    4930429A08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921898
    NCBI Gene: 74648
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:129041795-129083485 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 62.96 cM, cytoband D2.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    389 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921898
 protein coding gene Chr4:129041795-129083520 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028815
 protein coding gene Chr4:131008304-131056867 (-)
A/J MGP_AJ_G0028774
 protein coding gene Chr4:125821648-125863378 (-)
AKR/J MGP_AKRJ_G0028727
 protein coding gene Chr4:129309979-129351575 (-)
BALB/cJ MGP_BALBcJ_G0028797
 protein coding gene Chr4:126399985-126441430 (-)
C3H/HeJ MGP_C3HHeJ_G0028511
 protein coding gene Chr4:129358584-129399900 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029239
 protein coding gene Chr4:135971403-136014505 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026512
 protein coding gene Chr4:118948375-118990650 (-)
CAST/EiJ MGP_CASTEiJ_G0027944
 protein coding gene Chr4:127536300-127583656 (-)
CBA/J MGP_CBAJ_G0028477
 protein coding gene Chr4:139290555-139336381 (-)
DBA/2J MGP_DBA2J_G0028626
 protein coding gene Chr4:126247677-126289668 (-)
FVB/NJ MGP_FVBNJ_G0028593
 protein coding gene Chr4:125005252-125046756 (-)
LP/J MGP_LPJ_G0028727
 protein coding gene Chr4:131319180-131364717 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028619
 protein coding gene Chr4:144193082-144235278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029277
 protein coding gene Chr4:129680354-129724841 (-)
PWK/PhJ MGP_PWKPhJ_G0027665
 protein coding gene Chr4:122822726-122865406 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027492
 protein coding gene Chr4:125534512-125579684 (-)
WSB/EiJ MGP_WSBEiJ_G0028024
 protein coding gene Chr4:129788844-129832261 (-)



Homology
more
  • Human Ortholog
    S100PBP, S100P binding protein
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    S100PBP, S100P binding protein
  • Synonyms
    S100PBPR
  • Links
    NCBI Gene ID: 64766
    neXtProt AC: NX_Q96BU1
    UniProt: Q96BU1

  • Chr Location
    1p35.1; chr1:32816562-32858879 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    83
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74648 NCBI Gene Model | MGI Sequence Detail 41691 C57BL/6J ±  kb
transcript NM_001379588 RefSeq | MGI Sequence Detail 4662 C57BL/6  
polypeptide Q9D5K4 UniProt | EBI | MGI Sequence Detail 396 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 83
    cDNA 83

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140389
References
more
  • Summaries
    All 37
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory