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Tex55 Gene Detail
Summary
  • Symbol
    Tex55
  • Name
    testis expressed 55
  • Synonyms
    4930435E12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921913
    NCBI Gene: 74663
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:38632568-38649111 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 26.87 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    506 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921913
 protein coding gene Chr16:38632566-38649134 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022823
 protein coding gene Chr16:37357271-37377010 (-)
A/J MGP_AJ_G0022788
 protein coding gene Chr16:35509639-35527194 (-)
AKR/J MGP_AKRJ_G0022760
 protein coding gene Chr16:36855699-36877117 (-)
BALB/cJ MGP_BALBcJ_G0022789
 protein coding gene Chr16:35624864-35642586 (-)
C3H/HeJ MGP_C3HHeJ_G0022553
 protein coding gene Chr16:36956707-36974596 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023236
 protein coding gene Chr16:38216353-38235245 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020751
 protein coding gene Chr16:35884076-35900730 (-)
CAST/EiJ MGP_CASTEiJ_G0022079
 protein coding gene Chr16:37118883-37136320 (-)
CBA/J MGP_CBAJ_G0022524
 protein coding gene Chr16:39891582-39911336 (-)
DBA/2J MGP_DBA2J_G0022656
 protein coding gene Chr16:35387879-35405412 (-)
FVB/NJ MGP_FVBNJ_G0022631
 protein coding gene Chr16:35412434-35429774 (-)
LP/J MGP_LPJ_G0022724
 protein coding gene Chr16:37034412-37052762 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022650
 protein coding gene Chr16:38979563-39000242 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023251
 protein coding gene Chr16:36826363-36844336 (-)
PWK/PhJ MGP_PWKPhJ_G0021819
 protein coding gene Chr16:35805300-35822577 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021650
 protein coding gene Chr16:36712333-36730606 (-)
WSB/EiJ MGP_WSBEiJ_G0022123
 protein coding gene Chr16:36886116-36906244 (-)



Homology
more
  • Human Ortholog
    TEX55, testis expressed 55
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEX55, testis expressed 55
  • Synonyms
    C3orf30, TSCPA
  • Links
    NCBI Gene ID: 152405
    neXtProt AC: NX_Q96M34
    UniProt: Q96M34

  • Chr Location
    3q13.32; chr3:119146151-119160042 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Mice homozygous for a null allele exhibit normal male fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    5
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022798 Ensembl Gene Model | MGI Sequence Detail 16544 C57BL/6J ±  kb
transcript ENSMUST00000122078 Ensembl | MGI Sequence Detail 1367 Not Applicable  
polypeptide ENSMUSP00000113120 Ensembl | MGI Sequence Detail 381 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR040760 Testis-specific expressed protein 55
    IPR048377 TEX55, dimerization/docking domain
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:6277141
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:324144 Jamin SP, et al., Tex55 encodes a conserved putative A-kinase anchoring protein dispensable for male fertility in the mouse. Biol Reprod. 2021 Apr 1;104(4):731-733
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory