4833441D16Rik Gene Detail

Summary

• Symbol
  4833441D16Rik
• Name
  RIKEN cDNA 4833441D16 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922039
  NCBI Gene: 108962
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:3623054-3623547 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922039	lncRNA gene	Chr5:3623054-3623547 (.)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  6
• Literature Summary
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3

• NCBI Gene
  108962

Representative Sequences			Length	Strain/Species
transcript	BE628134	GenBank | ENA | DDBJ | MGI Sequence Detail	494	C57BL/6

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:2140746

References

• Summaries
  All 12

  Developmental Gene Expression 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:176132 O'Leary J, et al., Global analysis of gene expression in the developing brain of gtf2ird1 knockout mice. PLoS One. 2011;6(8):e23868