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Tex50 Gene Detail
Summary
  • Symbol
    Tex50
  • Name
    testis expressed 50
  • Synonyms
    4930469G21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922183
    NCBI Gene: 100502590
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:160984413-160986883 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 69.75 cM, cytoband H1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    150 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922183
 protein coding gene Chr1:160982128-160986884 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002775
 antisense lncRNA gene Chr1:166410806-166417581 (-)
A/J MGP_AJ_G0002751
 antisense lncRNA gene Chr1:159640897-159645674 (-)
AKR/J MGP_AKRJ_G0002732
 antisense lncRNA gene Chr1:164508507-164513251 (-)
BALB/cJ MGP_BALBcJ_G0002738
 antisense lncRNA gene Chr1:160185502-160190237 (-)
C3H/HeJ MGP_C3HHeJ_G0002696
 antisense lncRNA gene Chr1:164715488-164720249 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002881
 antisense lncRNA gene Chr1:172063624-172069909 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002428
 antisense lncRNA gene Chr1:151762326-151767032 (-)
CAST/EiJ MGP_CASTEiJ_G0002669
 antisense lncRNA gene Chr1:164325160-164330538 (-)
CBA/J MGP_CBAJ_G0002692
 antisense lncRNA gene Chr1:178155581-178160326 (-)
DBA/2J MGP_DBA2J_G0002698
 antisense lncRNA gene Chr1:158617725-158622914 (-)
FVB/NJ MGP_FVBNJ_G0002718
 antisense lncRNA gene Chr1:157026135-157031063 (-)
LP/J MGP_LPJ_G0002776
 antisense lncRNA gene Chr1:167506478-167511260 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002708
 antisense lncRNA gene Chr1:185715035-185719792 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002885
 antisense lncRNA gene Chr1:164330145-164335554 (-)
PWK/PhJ MGP_PWKPhJ_G0002626
 antisense lncRNA gene Chr1:157775901-157780683 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002577
 antisense lncRNA gene Chr1:163230100-163234868 (-)
WSB/EiJ MGP_WSBEiJ_G0002698
 antisense lncRNA gene Chr1:164518509-164523232 (-)



Homology
more
  • Human Ortholog
    TEX50, testis expressed 50
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100502590 NCBI Gene Model | MGI Sequence Detail 2471 C57BL/6J ±  kb
transcript NM_001195189 RefSeq | MGI Sequence Detail 953 C57BL/6  
polypeptide NP_001182118 RefSeq | MGI Sequence Detail 189 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038833 Testis-expressed protein 50
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:5898325
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory