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4930556M19Rik Gene Detail
Summary
  • Symbol
    4930556M19Rik
  • Name
    RIKEN cDNA 4930556M19 gene
  • Synonyms
    1700009D01Rik, C130022M03Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922509
    NCBI Gene: 75259
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:10714922-10790209 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 5.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1979 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922509
 lncRNA gene Chr15:10714912-10790209 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005582
 lincRNA gene Chr15:7869953-7875686 (+)
A/J MGP_AJ_G0005568
 lincRNA gene Chr15:7650285-7661447 (+)
AKR/J MGP_AKRJ_G0005547
 lincRNA gene Chr15:7833486-7838640 (+)
BALB/cJ MGP_BALBcJ_G0005549
 lincRNA gene Chr15:7571812-7577478 (+)
C3H/HeJ MGP_C3HHeJ_G0005496
 lincRNA gene Chr15:7780751-7786581 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005707
 lincRNA gene Chr15:8165172-8172283 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005073
 lincRNA gene Chr15:7132272-7138571 (+)
CAST/EiJ MGP_CASTEiJ_G0005439
 lincRNA gene Chr15:7847793-7856893 (+)
CBA/J MGP_CBAJ_G0005486
 lincRNA gene Chr15:8357970-8370267 (+)
DBA/2J MGP_DBA2J_G0005501
 lincRNA gene Chr15:7520017-7525394 (+)
FVB/NJ MGP_FVBNJ_G0005527
 lincRNA gene Chr15:7380111-7385152 (+)
LP/J MGP_LPJ_G0005585
 lincRNA gene Chr15:7771880-7778273 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005512
 lincRNA gene Chr15:8622937-8628166 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005705
 lincRNA gene Chr15:7815237-7820935 (+)
PWK/PhJ MGP_PWKPhJ_G0005389
 lincRNA gene Chr15:7691933-7698394 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005307
 lincRNA gene Chr15:7770518-7781606 (+)
WSB/EiJ MGP_WSBEiJ_G0005489
 lincRNA gene Chr15:7811108-7818165 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
Sequences &
Gene Models
less
  • All Sequences
    61
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 75259 NCBI Gene Model | MGI Sequence Detail 75288 C57BL/6J ±  kb
transcript NR_045063 RefSeq | MGI Sequence Detail 2468 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 1
Other
Accession IDs
less
MGI:1916563, MGI:2444779
References
more
  • Summaries
    All 15
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory