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Cimip2c Gene Detail
Summary
  • Symbol
    Cimip2c
  • Name
    ciliary microtubule inner protein 2C
  • Synonyms
    1700001C02Rik, 1700047H18Rik, Fam166c
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922684
    NCBI Gene: 75434
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:30623395-30641433 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 16.57 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    566 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922684
 protein coding gene Chr5:30623391-30641433 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029390
 protein coding gene Chr5:28406287-28424169 (+)
A/J MGP_AJ_G0029356
 protein coding gene Chr5:27477267-27495461 (+)
AKR/J MGP_AKRJ_G0029307
 protein coding gene Chr5:28618029-28637706 (+)
BALB/cJ MGP_BALBcJ_G0029367
 protein coding gene Chr5:28004143-28022167 (+)
C3H/HeJ MGP_C3HHeJ_G0029088
 protein coding gene Chr5:28614136-28633461 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029820
 protein coding gene Chr5:30140425-30159936 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027058
 protein coding gene Chr5:24970337-24987804 (+)
CAST/EiJ MGP_CASTEiJ_G0028499
 protein coding gene Chr5:27710199-27728206 (+)
CBA/J MGP_CBAJ_G0029056
 protein coding gene Chr5:30736964-30757399 (+)
DBA/2J MGP_DBA2J_G0029205
 protein coding gene Chr5:27665792-27684208 (+)
FVB/NJ MGP_FVBNJ_G0029163
 protein coding gene Chr5:27077040-27095344 (+)
LP/J MGP_LPJ_G0029290
 protein coding gene Chr5:28863671-28883131 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029192
 protein coding gene Chr5:31638205-31657539 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029854
 protein coding gene Chr5:28121882-28141216 (+)
PWK/PhJ MGP_PWKPhJ_G0028223
 protein coding gene Chr5:26780106-26798182 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028054
 protein coding gene Chr5:27463351-27483467 (+)
WSB/EiJ MGP_WSBEiJ_G0028579
 protein coding gene Chr5:28198906-28216957 (+)



Homology
more
  • Human Ortholog
    CIMIP2C, ciliary microtubule inner protein 2C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIMIP2C, ciliary microtubule inner protein 2C
  • Synonyms
    C2orf70, FAM166C
  • Links
    NCBI Gene ID: 339778
    neXtProt AC: NX_A6NJV1
    UniProt: A6NJV1

  • Chr Location
    2p23.3; chr2:26562585-26579532 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    29 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Radiation induced
    3
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    6 involving Cimip2c
  • Find Mice (IMSR)
    14 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    747
  • Tissues
    32
  • cDNA Data
    11
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75434 NCBI Gene Model | MGI Sequence Detail 18039 C57BL/6J ±  kb
transcript NM_001417888 RefSeq | MGI Sequence Detail 863 C57BL/6  
polypeptide Q9DAS2 UniProt | EBI | MGI Sequence Detail 200 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1920619, MGI:6369069, MGI:7470737
References
more
  • Summaries
    All 57
    Developmental Gene Expression 4
    Diseases 1
    Gene Ontology 4
    Phenotypes 29
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory