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1700003F12Rik Gene Detail
Summary
  • Symbol
    1700003F12Rik
  • Name
    RIKEN cDNA 1700003F12 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922730
    NCBI Gene: 75480
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:154390824-154391970 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 76.79 cM, cytoband H2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    117 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922730
 protein coding gene Chr2:154389005-154391970 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026717
 protein coding gene Chr2:159302516-159305462 (+)
A/J MGP_AJ_G0026683
 protein coding gene Chr2:152947005-152950083 (+)
AKR/J MGP_AKRJ_G0026654
 protein coding gene Chr2:157398376-157405731 (+)
BALB/cJ MGP_BALBcJ_G0026692
 protein coding gene Chr2:153244702-153247598 (+)
C3H/HeJ MGP_C3HHeJ_G0026435
 protein coding gene Chr2:157756658-157760686 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027141
 protein coding gene Chr2:163953135-163956013 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024511
 protein coding gene Chr2:146476891-146479781 (+)
CAST/EiJ MGP_CASTEiJ_G0025896
 protein coding gene Chr2:158073034-158075917 (+)
CBA/J MGP_CBAJ_G0026412
 protein coding gene Chr2:169914620-169920710 (+)
DBA/2J MGP_DBA2J_G0026549
 protein coding gene Chr2:152166388-152169275 (+)
FVB/NJ MGP_FVBNJ_G0026516
 protein coding gene Chr2:150553605-150556506 (+)
LP/J MGP_LPJ_G0026654
 protein coding gene Chr2:159420577-159423809 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026537
 protein coding gene Chr2:173964390-173968633 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027197
 protein coding gene Chr2:157273245-157276125 (+)
PWK/PhJ MGP_PWKPhJ_G0025630
 protein coding gene Chr2:151655548-151658528 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025433
 protein coding gene Chr2:156232467-156236442 (+)
WSB/EiJ MGP_WSBEiJ_G0025966
 protein coding gene Chr2:158195191-158199624 (+)



Homology
more
  • Human Ortholog
    C20orf144, chromosome 20 open reading frame 144
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C20orf144, chromosome 20 open reading frame 144
  • Synonyms
    dJ63M2.6
  • Links
    NCBI Gene ID: 128864
    neXtProt AC: NX_Q9BQM9
    UniProt: Q9BQM9

  • Chr Location
    20q11.22; chr20:33662327-33665619 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    722
  • Tissues
    5
  • cDNA Data
    20
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 75480 NCBI Gene Model | MGI Sequence Detail 1147 C57BL/6J ±  kb
    transcript NM_029305 RefSeq | MGI Sequence Detail 757 C57BL/6  
    polypeptide NP_083581 RefSeq | MGI Sequence Detail 197 C57BL/6  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR029296 Putative Bcl-2 like protein of testis
    • GlyGen
      A2AKE5 1 site, 1 N-linked glycan (1 site)
    Molecular
    Reagents
    less
    • All nucleic 20
      cDNA 20

      Microarray probesets 3
    References
    more
    • Summaries
      All 24
      Developmental Gene Expression 1
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory