1700010B13Rik Gene Detail

Summary

• Symbol
  1700010B13Rik
• Name
  RIKEN cDNA 1700010B13 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922741
  NCBI Gene: 100503661
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:73517701-73524196 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 34.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  260 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922741	lncRNA gene	Chr15:73517701-73524196 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015300	unclassified non-coding RNA gene	Chr15:73392205-73398411 (+)
A/J	MGP_AJ_G0015275	unclassified non-coding RNA gene	Chr15:70774297-70781731 (+)
AKR/J	MGP_AKRJ_G0015238	unclassified non-coding RNA gene	Chr15:72578012-72584510 (+)
BALB/cJ	MGP_BALBcJ_G0015239	unclassified non-coding RNA gene	Chr15:70778757-70785327 (+)
C3H/HeJ	MGP_C3HHeJ_G0015062	unclassified non-coding RNA gene	Chr15:72728607-72735108 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015693	unclassified non-coding RNA gene	Chr15:76185519-76192012 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013434	unclassified non-coding RNA gene	Chr15:67196839-67203215 (+)
CAST/EiJ	MGP_CASTEiJ_G0014613	unclassified non-coding RNA gene	Chr15:73531332-73538229 (+)
CBA/J	MGP_CBAJ_G0015042	unclassified non-coding RNA gene	Chr15:78676306-78682803 (+)
DBA/2J	MGP_DBA2J_G0015136	unclassified non-coding RNA gene	Chr15:70376733-70383022 (+)
FVB/NJ	MGP_FVBNJ_G0015144	unclassified non-coding RNA gene	Chr15:69390686-69397348 (+)
LP/J	MGP_LPJ_G0015216	unclassified non-coding RNA gene	Chr15:73418263-73426133 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015169	unclassified non-coding RNA gene	Chr15:84040439-84046746 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015732	unclassified non-coding RNA gene	Chr15:72976953-72983231 (+)
PWK/PhJ	MGP_PWKPhJ_G0014404	unclassified non-coding RNA gene	Chr15:70472547-70478852 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014192	unclassified non-coding RNA gene	Chr15:72865725-72873665 (+)
WSB/EiJ	MGP_WSBEiJ_G0014721	unclassified non-coding RNA gene	Chr15:72971914-72979428 (+)

Homology

• Gene Tree
  1700010B13Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  16
• Chemically induced (other)
  3
• Gene trapped
  12
• Radiation induced
  1
• Genomic Mutations
  4 involving 1700010B13Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000099958 (Evidence)
• NCBI Gene
  100503661

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099958	Ensembl Gene Model | MGI Sequence Detail	6496	C57BL/6J
transcript	ENSMUST00000188278	Ensembl | MGI Sequence Detail	1729	Not Applicable

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 33

  Phenotypes 23
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27