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Krtap9-3 Gene Detail
Summary
  • Symbol
    Krtap9-3
  • Name
    keratin associated protein 9-3
  • Synonyms
    2310040M23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922836
    NCBI Gene: 75586
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99488174-99488932 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 62.94 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922836
 protein coding gene Chr11:99488173-99488932 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019103
 protein coding gene Chr11:102275841-102276608 (-)
A/J MGP_AJ_G0019072
 protein coding gene Chr11:97968498-97969265 (-)
AKR/J MGP_AKRJ_G0019042
 protein coding gene Chr11:101007524-101008291 (-)
BALB/cJ MGP_BALBcJ_G0019046
 protein coding gene Chr11:98478146-98478904 (-)
C3H/HeJ MGP_C3HHeJ_G0018859
 protein coding gene Chr11:101161901-101162668 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019496
 protein coding gene Chr11:105406484-105407242 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017129
 protein coding gene Chr11:95526885-95527648 (-)
CAST/EiJ MGP_CASTEiJ_G0018414
 protein coding gene Chr11:102161669-102162436 (-)
CBA/J MGP_CBAJ_G0018830
 protein coding gene Chr11:109805152-109805910 (-)
DBA/2J MGP_DBA2J_G0018938
 protein coding gene Chr11:97543878-97544645 (-)
FVB/NJ MGP_FVBNJ_G0018927
 protein coding gene Chr11:97042397-97043164 (-)
LP/J MGP_LPJ_G0019008
 protein coding gene Chr11:102744201-102744968 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018954
 protein coding gene Chr11:109467473-109475106 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019537
 protein coding gene Chr11:101372150-101372917 (-)
PWK/PhJ MGP_PWKPhJ_G0018185
 protein coding gene Chr11:98610345-98611112 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017973
 protein coding gene Chr11:101122457-101123224 (-)
WSB/EiJ MGP_WSBEiJ_G0018462
 protein coding gene Chr11:101337786-101338553 (-)



Homology
more
  • Human Ortholog
    KRTAP1-3, keratin associated protein 1-3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP1-3, keratin associated protein 1-3
  • Synonyms
    KAP1.2, KAP1.3, KAP1.6, KAP1.8A, KAP1.8B, KAP1.9, KRTAP1.3
  • Links
    NCBI Gene ID: 81850
    neXtProt AC: NX_Q8IUG1
    UniProt: Q8IUG1

  • Chr Location
    17q21.2; chr17:41033884-41034874 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    6
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 75586 NCBI Gene Model | MGI Sequence Detail 759 C57BL/6J ±  kb
transcript NM_029351 RefSeq | MGI Sequence Detail 759 C57BL/6  
polypeptide Q3V2C1 UniProt | EBI | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory