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Malsu1 Gene Detail
Summary
  • Symbol
    Malsu1
  • Name
    mitochondrial assembly of ribosomal large subunit 1
  • Synonyms
    2410003K15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922843
    NCBI Gene: 75593
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:49050729-49063685 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 23.82 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    308 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922843
 protein coding gene Chr6:49050729-49116078 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030720
 protein coding gene Chr6:48059043-48071821 (+)
A/J MGP_AJ_G0030691
 protein coding gene Chr6:45866465-45879711 (+)
AKR/J MGP_AKRJ_G0030616
 protein coding gene Chr6:47483423-47496347 (+)
BALB/cJ MGP_BALBcJ_G0030701
 protein coding gene Chr6:46205343-46218627 (+)
C3H/HeJ MGP_C3HHeJ_G0030414
 protein coding gene Chr6:47484250-47499827 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031156
 protein coding gene Chr6:49191097-49205349 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028363
 protein coding gene Chr6:43478570-43491904 (+)
CAST/EiJ MGP_CASTEiJ_G0029818
 protein coding gene Chr6:47210370-47225024 (+)
CBA/J MGP_CBAJ_G0030389
 protein coding gene Chr6:51229435-51245423 (+)
DBA/2J MGP_DBA2J_G0030538
 protein coding gene Chr6:45778890-45791806 (+)
FVB/NJ MGP_FVBNJ_G0030490
 protein coding gene Chr6:45421057-45434226 (+)
LP/J MGP_LPJ_G0030623
 protein coding gene Chr6:48039842-48053863 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030524
 protein coding gene Chr6:53995567-54009876 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031185
 protein coding gene Chr6:47347891-47360844 (+)
PWK/PhJ MGP_PWKPhJ_G0029530
 protein coding gene Chr6:45324932-45338319 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029366
 protein coding gene Chr6:46692633-46706481 (+)
WSB/EiJ MGP_WSBEiJ_G0029895
 protein coding gene Chr6:47347294-47360843 (+)



Homology
more
  • Human Ortholog
    MALSU1, mitochondrial assembly of ribosomal large subunit 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MALSU1, mitochondrial assembly of ribosomal large subunit 1
  • Synonyms
    C7orf30, mtRsfA
  • Links
    NCBI Gene ID: 115416
    neXtProt AC: NX_Q96EH3
    UniProt: Q96EH3

  • Chr Location
    7p15.3; chr7:23298739-23311729 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029815 Ensembl Gene Model | MGI Sequence Detail 12957 C57BL/6J ±  kb
transcript ENSMUST00000128616 Ensembl | MGI Sequence Detail 2819 Not Applicable  
polypeptide ENSMUSP00000122941 Ensembl | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000032312 mitochondrial assembly of ribosomal large subunit protein 1
    (term hierarchy)
  • InterPro Domains
    IPR043519 Nucleotidyltransferase superfamily
    IPR004394 Protein Iojap/ribosomal silencing factor RsfS
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory