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1700020L13Rik Gene Detail
Summary
  • Symbol
    1700020L13Rik
  • Name
    RIKEN cDNA 1700020L13 gene
  • Synonyms
    1700020L13Rik, Thap8
Location &
Maps
more
  • Sequence Map
    Chr7:29980458-29989177 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 17.37 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    415 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922879
 protein coding gene Chr7:29979519-29989662 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032010
 protein coding gene Chr7:29265323-29275634 (+)
A/J MGP_AJ_G0031987
 protein coding gene Chr7:28490592-28500799 (+)
AKR/J MGP_AKRJ_G0031920
 protein coding gene Chr7:29222273-29232480 (+)
BALB/cJ MGP_BALBcJ_G0031994
 protein coding gene Chr7:28665978-28676185 (+)
C3H/HeJ MGP_C3HHeJ_G0031713
 protein coding gene Chr7:29663858-29674001 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032459
 protein coding gene Chr7:30209153-30219292 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029510
 protein coding gene Chr7:29526762-29536953 (+)
CAST/EiJ MGP_CASTEiJ_G0031047
 protein coding gene Chr7:22915716-22926120 (+)
CBA/J MGP_CBAJ_G0031679
 protein coding gene Chr7:31672215-31682358 (+)
DBA/2J MGP_DBA2J_G0031831
 protein coding gene Chr7:28219650-28229857 (+)
FVB/NJ MGP_FVBNJ_G0031788
 protein coding gene Chr7:28337534-28347671 (+)
LP/J MGP_LPJ_G0031912
 protein coding gene Chr7:29584779-29594987 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031824
 protein coding gene Chr7:30920884-30932197 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032488
 protein coding gene Chr7:28717797-28727936 (+)
PWK/PhJ MGP_PWKPhJ_G0030773
 protein coding gene Chr7:23254043-23264814 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030606
 protein coding gene Chr7:19721918-19731843 (+)
WSB/EiJ MGP_WSBEiJ_G0031157
 protein coding gene Chr7:29101051-29111211 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000013928 Ensembl Gene Model | MGI Sequence Detail 8720 C57BL/6J ±  kb
transcript ENSMUST00000249334 Ensembl | MGI Sequence Detail 693 Not Applicable  
polypeptide Q9DA53 UniProt | EBI | MGI Sequence Detail 214 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:6434398
References
more
  • Summaries
    All 19
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory