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1700020G17Rik Gene Detail
Summary
  • Symbol
    1700020G17Rik
  • Name
    RIKEN cDNA 1700020G17 gene
  • Synonyms
    4930480D05Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922880
    NCBI Gene: 75630
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:110637035-110732368 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3013 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922880
 lncRNA gene Chr10:110620446-110732411 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002896
 antisense lncRNA gene Chr10:113149972-113259858 (-)
A/J MGP_AJ_G0002873
 antisense lncRNA gene Chr10:108859924-108965080 (-)
AKR/J MGP_AKRJ_G0002854
 antisense lncRNA gene Chr10:112032870-112148060 (-)
BALB/cJ MGP_BALBcJ_G0002861
 antisense lncRNA gene Chr10:109259683-109369302 (-)
C3H/HeJ MGP_C3HHeJ_G0002817
 antisense lncRNA gene Chr10:112160253-112281959 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003004
 antisense lncRNA gene Chr10:117069379-117186708 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002546
 antisense lncRNA gene Chr10:103726743-103841353 (-)
CAST/EiJ MGP_CASTEiJ_G0002789
 antisense lncRNA gene Chr10:112334628-112443999 (-)
CBA/J MGP_CBAJ_G0002813
 antisense lncRNA gene Chr10:121637625-121753696 (-)
DBA/2J MGP_DBA2J_G0002820
 antisense lncRNA gene Chr10:107987423-108093066 (-)
FVB/NJ MGP_FVBNJ_G0002839
 antisense lncRNA gene Chr10:106987578-107102608 (-)
LP/J MGP_LPJ_G0002896
 antisense lncRNA gene Chr10:113783833-113895176 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002828
 antisense lncRNA gene Chr10:124361695-124472996 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003007
 antisense lncRNA gene Chr10:112044405-112157187 (-)
PWK/PhJ MGP_PWKPhJ_G0002747
 antisense lncRNA gene Chr10:108066774-108184662 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002696
 antisense lncRNA gene Chr10:110818927-110931040 (-)
WSB/EiJ MGP_WSBEiJ_G0002818
 antisense lncRNA gene Chr10:112197623-112301385 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 75630 NCBI Gene Model | MGI Sequence Detail 95334 C57BL/6J ±  kb
transcript NR_045979 RefSeq | MGI Sequence Detail 610 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
Other
Accession IDs
less
MGI:1922198
References
more
  • Summaries
    All 17
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory