1700011B04Rik Gene Detail

Summary

• Symbol
  1700011B04Rik
• Name
  RIKEN cDNA 1700011B04 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922894
  NCBI Gene: 100503727
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:35365606-35371997 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 14.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922894	lncRNA gene	Chr13:35351910-35372000 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015255	unclassified non-coding RNA gene	Chr13:33327833-33335578 (+)
A/J	MGP_AJ_G0015229	unclassified non-coding RNA gene	Chr13:32314798-32322524 (+)
AKR/J	MGP_AKRJ_G0015192	unclassified non-coding RNA gene	Chr13:33115248-33122982 (+)
BALB/cJ	MGP_BALBcJ_G0015191	unclassified non-coding RNA gene	Chr13:32390175-32397909 (+)
C3H/HeJ	MGP_C3HHeJ_G0015015	unclassified non-coding RNA gene	Chr13:33019190-33026924 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015648	unclassified non-coding RNA gene	Chr13:34485060-34493225 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013390	unclassified non-coding RNA gene	Chr13:30606206-30614302 (+)
CAST/EiJ	MGP_CASTEiJ_G0014568	unclassified non-coding RNA gene	Chr13:32704706-32713414 (+)
CBA/J	MGP_CBAJ_G0014994	unclassified non-coding RNA gene	Chr13:35956974-35964700 (+)
DBA/2J	MGP_DBA2J_G0015087	unclassified non-coding RNA gene	Chr13:31869782-31877516 (+)
FVB/NJ	MGP_FVBNJ_G0015098	unclassified non-coding RNA gene	Chr13:31419681-31427428 (+)
LP/J	MGP_LPJ_G0015168	unclassified non-coding RNA gene	Chr13:33585556-33593290 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015125	unclassified non-coding RNA gene	Chr13:36116019-36123754 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015687	unclassified non-coding RNA gene	Chr13:32744201-32751935 (+)
PWK/PhJ	MGP_PWKPhJ_G0014360	unclassified non-coding RNA gene	Chr13:31993018-32001201 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014147	unclassified non-coding RNA gene	Chr13:31432145-31439853 (+)
WSB/EiJ	MGP_WSBEiJ_G0014671	unclassified non-coding RNA gene	Chr13:33105293-33113677 (+)

Homology

• Gene Tree
  1700011B04Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 1700011B04Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1

• Ensembl
  ENSMUSG00000102099 (Evidence)
• NCBI Gene
  100503727

Representative Sequences			Length	Strain/Species
genomic	100503727	NCBI Gene Model | MGI Sequence Detail	6392	C57BL/6J
transcript	NR_045616	RefSeq | MGI Sequence Detail	648	C57BL/6

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563