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5033403F01Rik Gene Detail
Summary
  • Symbol
    5033403F01Rik
  • Name
    RIKEN cDNA 5033403F01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923208
    NCBI Gene: 75958
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:39144595-39150273 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 18.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923208
 lncRNA gene Chr13:39144595-39150581 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005451
 lincRNA gene Chr13:37341628-37347308 (+)
A/J MGP_AJ_G0005437
 lincRNA gene Chr13:36143776-36149456 (+)
AKR/J MGP_AKRJ_G0005416
 lincRNA gene Chr13:37117887-37123567 (+)
BALB/cJ MGP_BALBcJ_G0005418
 lincRNA gene Chr13:36259754-36265434 (+)
C3H/HeJ MGP_C3HHeJ_G0005366
 lincRNA gene Chr13:36947365-36953045 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005573
 lincRNA gene Chr13:38556061-38561741 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004950
 lincRNA gene Chr13:34319874-34325583 (+)
CAST/EiJ MGP_CASTEiJ_G0005309
 lincRNA gene Chr13:36736299-36741995 (+)
CBA/J MGP_CBAJ_G0005355
 lincRNA gene Chr13:40211402-40217082 (+)
DBA/2J MGP_DBA2J_G0005371
 lincRNA gene Chr13:35662917-35668597 (+)
FVB/NJ MGP_FVBNJ_G0005397
 lincRNA gene Chr13:35191937-35197617 (+)
LP/J MGP_LPJ_G0005454
 lincRNA gene Chr13:37597033-37602713 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005380
 lincRNA gene Chr13:40240414-40246094 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005573
 lincRNA gene Chr13:36683998-36689678 (+)
PWK/PhJ MGP_PWKPhJ_G0005258
 lincRNA gene Chr13:35793089-35799018 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0005358
 lincRNA gene Chr13:37039452-37045132 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 75958 NCBI Gene Model | MGI Sequence Detail 5679 C57BL/6J ±  kb
transcript NR_131019 RefSeq | MGI Sequence Detail 1370 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory