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5031415H12Rik Gene Detail
Summary
  • Symbol
    5031415H12Rik
  • Name
    RIKEN cDNA 5031415H12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923234
    NCBI Gene: 75984
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:71052324-71062577 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    357 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923234
 lncRNA gene Chr17:71052324-71062577 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005750
 lincRNA gene Chr17:73140154-73150320 (-)
A/J MGP_AJ_G0005737
 lincRNA gene Chr17:70910260-70920422 (-)
AKR/J MGP_AKRJ_G0005716
 lincRNA gene Chr17:71892306-71904184 (-)
BALB/cJ MGP_BALBcJ_G0005717
 lincRNA gene Chr17:70842756-70853458 (-)
C3H/HeJ MGP_C3HHeJ_G0005665
 lincRNA gene Chr17:72833167-72844955 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005877
 lincRNA gene Chr17:75795108-75806760 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005607
 lincRNA gene Chr17:73261501-73272389 (-)
CBA/J MGP_CBAJ_G0005653
 lincRNA gene Chr17:78937691-78951349 (-)
DBA/2J MGP_DBA2J_G0005671
 lincRNA gene Chr17:69610999-69621587 (-)
FVB/NJ MGP_FVBNJ_G0005697
 lincRNA gene Chr17:69074584-69084735 (-)
LP/J MGP_LPJ_G0005752
 lincRNA gene Chr17:73895882-73906062 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005682
 lincRNA gene Chr17:78861634-78873100 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005877
 lincRNA gene Chr17:72406365-72417566 (-)
PWK/PhJ MGP_PWKPhJ_G0005551
 lincRNA gene Chr17:68900841-68911215 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005469
 lincRNA gene Chr17:69121481-69133643 (-)
WSB/EiJ MGP_WSBEiJ_G0005659
 lincRNA gene Chr17:73200277-73211697 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097282 Ensembl Gene Model | MGI Sequence Detail 10254 C57BL/6J ±  kb
transcript ENSMUST00000181546 Ensembl | MGI Sequence Detail 2481 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory