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6430710C18Rik Gene Detail
Summary
  • Symbol
    6430710C18Rik
  • Name
    RIKEN cDNA 6430710C18 gene
  • Synonyms
    5033406J01Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923468
    NCBI Gene: 76218
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:72576190-72644061 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 43.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1825 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923468
 lncRNA gene Chr2:72576190-72644061 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005934
 lincRNA gene Chr2:72959640-73033135 (-)
A/J MGP_AJ_G0005927
 lincRNA gene Chr2:70086798-70154954 (-)
AKR/J MGP_AKRJ_G0005902
 lincRNA gene Chr2:72030825-72097997 (-)
BALB/cJ MGP_BALBcJ_G0005905
 lincRNA gene Chr2:70301633-70370756 (-)
C3H/HeJ MGP_C3HHeJ_G0005853
 lincRNA gene Chr2:72224540-72294071 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006066
 lincRNA gene Chr2:75147618-75219175 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005399
 lincRNA gene Chr2:67321745-67387385 (-)
CAST/EiJ MGP_CASTEiJ_G0005789
 lincRNA gene Chr2:72447900-72527087 (-)
CBA/J MGP_CBAJ_G0005838
 lincRNA gene Chr2:77900608-77973504 (-)
DBA/2J MGP_DBA2J_G0005859
 lincRNA gene Chr2:69713221-69781403 (-)
FVB/NJ MGP_FVBNJ_G0005884
 lincRNA gene Chr2:69126827-69194970 (-)
LP/J MGP_LPJ_G0005938
 lincRNA gene Chr2:72846203-72918626 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005872
 lincRNA gene Chr2:79838236-79911311 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006063
 lincRNA gene Chr2:72105781-72177870 (-)
PWK/PhJ MGP_PWKPhJ_G0005738
 lincRNA gene Chr2:69604677-69672548 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005650
 lincRNA gene Chr2:72342838-72413666 (-)
WSB/EiJ MGP_WSBEiJ_G0005842
 lincRNA gene Chr2:72559863-72631148 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 76218 NCBI Gene Model | MGI Sequence Detail 67872 C57BL/6J ±  kb
transcript NR_102348 RefSeq | MGI Sequence Detail 1585 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925314
References
more
  • Summaries
    All 25
    Phenotypes 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:239094 Schep R, et al., Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7720-E7729
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory