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1700012C08Rik Gene Detail
Summary
  • Symbol
    1700012C08Rik
  • Name
    RIKEN cDNA 1700012C08 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923635
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:117070531-117070979 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923635
 lncRNA gene Chr4:117070531-117070979 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015570
 unclassified non-coding RNA gene Chr4:118176319-118176767 (-)
A/J MGP_AJ_G0015547
 unclassified non-coding RNA gene Chr4:113620578-113621026 (-)
AKR/J MGP_AKRJ_G0015511
 unclassified non-coding RNA gene Chr4:116102287-116102735 (-)
BALB/cJ MGP_BALBcJ_G0015509
 unclassified non-coding RNA gene Chr4:114249149-114249597 (-)
C3H/HeJ MGP_C3HHeJ_G0015331
 unclassified non-coding RNA gene Chr4:117687580-117688028 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015962
 unclassified non-coding RNA gene Chr4:122742472-122742920 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013698
 unclassified non-coding RNA gene Chr4:107659682-107660130 (-)
CAST/EiJ MGP_CASTEiJ_G0014886
 unclassified non-coding RNA gene Chr4:114892161-114892609 (-)
CBA/J MGP_CBAJ_G0015312
 unclassified non-coding RNA gene Chr4:126094394-126094842 (-)
DBA/2J MGP_DBA2J_G0015406
 unclassified non-coding RNA gene Chr4:114252895-114253343 (-)
FVB/NJ MGP_FVBNJ_G0015413
 unclassified non-coding RNA gene Chr4:112759311-112759759 (-)
LP/J MGP_LPJ_G0015486
 unclassified non-coding RNA gene Chr4:118360450-118360898 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015436
 unclassified non-coding RNA gene Chr4:131043523-131043971 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016004
 unclassified non-coding RNA gene Chr4:117254373-117254821 (-)
PWK/PhJ MGP_PWKPhJ_G0014671
 unclassified non-coding RNA gene Chr4:111054911-111055359 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014460
 unclassified non-coding RNA gene Chr4:113556832-113557280 (-)
WSB/EiJ MGP_WSBEiJ_G0014991
 unclassified non-coding RNA gene Chr4:117130816-117131264 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 1700012C08Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086482 Ensembl Gene Model | MGI Sequence Detail 449 C57BL/6J ±  kb
transcript ENSMUST00000141554 Ensembl | MGI Sequence Detail 363 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory