About   Help   FAQ
Ankrd48 Gene Detail
Summary
  • Symbol
    Ankrd48
  • Name
    ankyrin repeat domain 48
  • Synonyms
    1700008J08Rik, 1700012M14Rik, Ankrd36, GC3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923639
    NCBI Gene: 76389
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:5519684-5639337 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 3.71 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3429 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923639
 protein coding gene Chr11:5519680-5639617 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018003
 protein coding gene Chr11:2633208-2763196 (+)
A/J MGP_AJ_G0017976
 protein coding gene Chr11:2534313-2658877 (+)
AKR/J MGP_AKRJ_G0017940
 protein coding gene Chr11:2671733-2802333 (+)
BALB/cJ MGP_BALBcJ_G0017944
 protein coding gene Chr11:2523750-2649547 (+)
C3H/HeJ MGP_C3HHeJ_G0017757
 protein coding gene Chr11:2542462-2666278 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018396
 protein coding gene Chr11:2701036-2832948 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016054
 protein coding gene Chr11:2423688-2546908 (+)
CAST/EiJ MGP_CASTEiJ_G0017319
 protein coding gene Chr11:2507767-2629480 (+)
CBA/J MGP_CBAJ_G0017732
 protein coding gene Chr11:3033159-3174364 (+)
DBA/2J MGP_DBA2J_G0017842
 protein coding gene Chr11:2433089-2554711 (+)
FVB/NJ MGP_FVBNJ_G0017834
 protein coding gene Chr11:2472611-2592219 (+)
LP/J MGP_LPJ_G0017913
 protein coding gene Chr11:2704364-2846688 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017860
 protein coding gene Chr11:2661875-2803876 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018436
 protein coding gene Chr11:2667931-2801167 (+)
PWK/PhJ MGP_PWKPhJ_G0017099
 protein coding gene Chr11:2461432-2588521 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016896
 protein coding gene Chr11:2640194-2762973 (+)
WSB/EiJ MGP_WSBEiJ_G0017373
 protein coding gene Chr11:2517001-2648403 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020481 Ensembl Gene Model | MGI Sequence Detail 119654 C57BL/6J ±  kb
    transcript ENSMUST00000109856 Ensembl | MGI Sequence Detail 4491 Not Applicable  
    polypeptide ENSMUSP00000105482 Ensembl | MGI Sequence Detail 1415 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • InterPro Domains
      IPR002110 Ankyrin repeat
      IPR036770 Ankyrin repeat-containing domain superfamily
      IPR050657 Ankyrin repeat domain-containing protein
    Molecular
    Reagents
    less
    • All nucleic 16
      Genomic 1
      cDNA 15

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1919092, MGI:7620043
    References
    more
    • Summaries
      All 31
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory