About   Help   FAQ
Smim45 Gene Detail
Summary
  • Symbol
    Smim45
  • Name
    small integral membrane protein 45
  • Synonyms
    1500009C09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923755
    NCBI Gene: 76505
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:82136673-82144947 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 38.56 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    353 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923755
 protein coding gene Chr15:82136598-82144954 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022139
 protein coding gene Chr15:82755735-82768195 (+)
A/J MGP_AJ_G0022099
 protein coding gene Chr15:79824183-79832643 (+)
AKR/J MGP_AKRJ_G0022075
 protein coding gene Chr15:82039161-82049001 (+)
BALB/cJ MGP_BALBcJ_G0022105
 protein coding gene Chr15:79871212-79880704 (+)
C3H/HeJ MGP_C3HHeJ_G0021876
 protein coding gene Chr15:82054054-82062769 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022548
 protein coding gene Chr15:85994397-86004666 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020077
 protein coding gene Chr15:76261201-76269364 (+)
CAST/EiJ MGP_CASTEiJ_G0021396
 protein coding gene Chr15:82849452-82858517 (+)
CBA/J MGP_CBAJ_G0021841
 protein coding gene Chr15:88688584-88703597 (+)
DBA/2J MGP_DBA2J_G0021969
 protein coding gene Chr15:79294212-79302495 (+)
FVB/NJ MGP_FVBNJ_G0021946
 protein coding gene Chr15:78357692-78367859 (+)
LP/J MGP_LPJ_G0022038
 protein coding gene Chr15:82908232-82916624 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021967
 protein coding gene Chr15:93589344-93598774 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022562
 protein coding gene Chr15:82148570-82158000 (+)
PWK/PhJ MGP_PWKPhJ_G0021138
 protein coding gene Chr15:79349464-79359328 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020977
 protein coding gene Chr15:81927153-81937167 (+)
WSB/EiJ MGP_WSBEiJ_G0021447
 protein coding gene Chr15:82569243-82580015 (+)



Homology
more
  • Human Ortholog
    SMIM45, small integral membrane protein 45
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM45, small integral membrane protein 45
  • Synonyms
    BK250D10.8, LINC00634
  • Links
    NCBI Gene ID: 339674
    UniProt: A0A590UK83

  • Chr Location
    22q13.2; chr22:41946949-41958939 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    6
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Smim45
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    1
  • cDNA Data
    14
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    5
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 76505 NCBI Gene Model | MGI Sequence Detail 8275 C57BL/6J ±  kb
transcript NM_001395956 RefSeq | MGI Sequence Detail 1459 C57BL/6  
polypeptide NP_001382885 RefSeq | MGI Sequence Detail 68 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
Other
Accession IDs
less
MGI:6758199
References
more
  • Summaries
    All 41
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 23
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory