3010003L21Rik MGI Mouse Gene Detail - MGI:1924094

Sequence Map

Chr6:148846365-148848627 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924094	lncRNA gene	Chr6:148846355-148848627 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004400	antisense lncRNA gene	Chr6:154060785-154063054 (+)
A/J	MGP_AJ_G0004377	antisense lncRNA gene	Chr6:147940756-147943018 (+)
AKR/J	MGP_AKRJ_G0004359	antisense lncRNA gene	Chr6:152361295-152363558 (+)
BALB/cJ	MGP_BALBcJ_G0004363	antisense lncRNA gene	Chr6:147702426-147704685 (+)
C3H/HeJ	MGP_C3HHeJ_G0004312	antisense lncRNA gene	Chr6:152412937-152419139 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0003972	antisense lncRNA gene	Chr6:146662150-146664402 (+)
CAST/EiJ	MGP_CASTEiJ_G0004272	antisense lncRNA gene	Chr6:152083932-152086190 (+)
CBA/J	MGP_CBAJ_G0004306	antisense lncRNA gene	Chr6:164223494-164225756 (+)
DBA/2J	MGP_DBA2J_G0004321	antisense lncRNA gene	Chr6:146733612-146735874 (+)
FVB/NJ	MGP_FVBNJ_G0004339	antisense lncRNA gene	Chr6:145426291-145428643 (+)
LP/J	MGP_LPJ_G0004401	antisense lncRNA gene	Chr6:154192053-154195963 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004330	antisense lncRNA gene	Chr6:167865905-167869309 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004511	antisense lncRNA gene	Chr6:152202074-152204371 (+)
PWK/PhJ	MGP_PWKPhJ_G0004225	antisense lncRNA gene	Chr6:145253940-145256352 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004167	antisense lncRNA gene	Chr6:150307619-150309874 (+)
WSB/EiJ	MGP_WSBEiJ_G0004311	antisense lncRNA gene	Chr6:152819627-152821885 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000085355	Ensembl Gene Model \| MGI Sequence Detail	2263	C57BL/6J	± kb
transcript	ENSMUST00000154673	Ensembl \| MGI Sequence Detail	1747	Not Applicable
polypeptide	Q8C6B6	UniProt \| EBI \| MGI Sequence Detail	187	Not Applicable

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Summaries

All 16

Phenotypes 3
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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