4930447F24Rik Gene Detail

Summary

• Symbol
  4930447F24Rik
• Name
  RIKEN cDNA 4930447F24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1924123
  NCBI Gene: 76873
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:108010917-108015766 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924123	lncRNA gene	Chr9:108010917-108015766 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015760	unclassified non-coding RNA gene	Chr9:110064873-110069865 (+)
A/J	MGP_AJ_G0015737	unclassified non-coding RNA gene	Chr9:106039709-106044838 (+)
AKR/J	MGP_AKRJ_G0015700	unclassified non-coding RNA gene	Chr9:108686055-108691841 (+)
BALB/cJ	MGP_BALBcJ_G0015698	unclassified non-coding RNA gene	Chr9:105736922-105741445 (+)
C3H/HeJ	MGP_C3HHeJ_G0015519	unclassified non-coding RNA gene	Chr9:109082252-109087275 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016153	unclassified non-coding RNA gene	Chr9:113049477-113054379 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013878	unclassified non-coding RNA gene	Chr9:103475331-103477060 (+)
CAST/EiJ	MGP_CASTEiJ_G0015074	unclassified non-coding RNA gene	Chr9:109040810-109044984 (+)
CBA/J	MGP_CBAJ_G0015499	unclassified non-coding RNA gene	Chr9:117038373-117045781 (+)
DBA/2J	MGP_DBA2J_G0015598	unclassified non-coding RNA gene	Chr9:105495935-105499875 (+)
FVB/NJ	MGP_FVBNJ_G0015603	unclassified non-coding RNA gene	Chr9:104264265-104267987 (+)
LP/J	MGP_LPJ_G0015678	unclassified non-coding RNA gene	Chr9:110254802-110262261 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015626	unclassified non-coding RNA gene	Chr9:118630322-118636999 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016196	unclassified non-coding RNA gene	Chr9:108967871-108978063 (+)
PWK/PhJ	MGP_PWKPhJ_G0014857	unclassified non-coding RNA gene	Chr9:105819722-105821434 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014644	unclassified non-coding RNA gene	Chr9:109026109-109027822 (+)
WSB/EiJ	MGP_WSBEiJ_G0015178	unclassified non-coding RNA gene	Chr9:108846182-108850458 (+)

Homology

• Gene Tree
  4930447F24Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000102224 (Evidence)
• NCBI Gene
  76873

Representative Sequences			Length	Strain/Species
genomic	76873	NCBI Gene Model | MGI Sequence Detail	4850	C57BL/6J
transcript	NR_126077	RefSeq | MGI Sequence Detail	1359	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 3

References

• Summaries
  All 10
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573