About   Help   FAQ
Ralyl Gene Detail
Summary
  • Symbol
    Ralyl
  • Name
    RALY RNA binding protein-like
  • Synonyms
    0710005M24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924147
    NCBI Gene: 76897
  • Alliance
    genome feature page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:13536715-14247347 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 3.01 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    22998 from dbSNP Build 142
  • Strain Annotations
    21
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924147
 protein coding gene Chr3:13535942-14247347 (+)
129S1/SvImJ ENSMUSG00200018123
 protein coding gene Chr3:10746468-10982218 (+)
A/J ENSMUSGG00195055293
 protein coding gene Chr3:10863724-10864002 (+)
A/J ENSMUSG00195015220
 protein coding gene Chr3:11033331-11269277 (+)
AKR/J ENSMUSG00220009008
 protein coding gene Chr3:11081780-11317590 (+)
BALB/cJ ENSMUSG00180000973
 protein coding gene Chr3:11054275-11290193 (+)
BALB/cJ ENSMUSGG00180055363
 protein coding gene Chr3:10884702-10884980 (+)
C3H/HeJ ENSMUSGG00175054784
 protein coding gene Chr3:10870862-10871140 (+)
C3H/HeJ ENSMUSG00175003104
 protein coding gene Chr3:11040438-11285604 (+)
C57BL/6NJ ENSMUSGG00215055574
 protein coding gene Chr3:10883168-10883446 (+)
C57BL/6NJ ENSMUSG00215001198
 protein coding gene Chr3:11052750-11288669 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024850
 protein coding gene Chr3:9508903-9735520 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210001581
 protein coding gene Chr3:11025508-11261421 (+)
CBA/J ENSMUSGG00210054874
 protein coding gene Chr3:10855929-10856207 (+)
DBA/2J ENSMUSG00185000603
 protein coding gene Chr3:11022198-11264116 (+)
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J ENSMUSG00230004405
 protein coding gene Chr3:12948394-13184130 (+)
NOD/ShiLtJ ENSMUSG00190001896
 protein coding gene Chr3:11135690-11371598 (+)
NOD/ShiLtJ ENSMUSGG00190054902
 protein coding gene Chr3:10966109-10966387 (+)
NZO/HlLtJ ENSMUSGG00225055417
 protein coding gene Chr3:15366168-15366446 (+)
NZO/HlLtJ ENSMUSG00225000563
 protein coding gene Chr3:15530456-15766379 (+)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010001777
 protein coding gene Chr3:10379108-11123098 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    RALYL, RALY RNA binding protein like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RALYL, RALY RNA binding protein like
  • Synonyms
    HNRPCL3
  • Links
    NCBI Gene ID: 138046
    UniProt: Q86SE5

  • Chr Location
    8q21.2; chr8:84182787-84921844 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    636
  • Tissues
    4
  • cDNA Data
    10
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039717 Ensembl Gene Model | MGI Sequence Detail 710633 C57BL/6J ±  kb
transcript ENSMUST00000193117 Ensembl | MGI Sequence Detail 2933 Not Applicable  
polypeptide ENSMUSP00000148795 Ensembl | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 6
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:382585 Wang X, et al., RALYL increases hepatocellular carcinoma stemness by sustaining the mRNA stability of TGF-beta2. Nat Commun. 2021 Mar 9;12(1):1518
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory