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Usp46os2 Gene Detail
Summary
  • Symbol
    Usp46os2
  • Name
    ubiquitin specific peptidase 46, opposite strand 2
  • Synonyms
    1700112M01Rik, 4933411J23Rik, Gm15805
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924246
    NCBI Gene: 108169050
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:74192929-74200664 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 5, 39.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    354 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924246
lncRNA gene Chr5:74192929-74200664 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015604
unclassified non-coding RNA gene Chr5:74071233-74081094 (+)
A/J MGP_AJ_G0015580
unclassified non-coding RNA gene Chr5:71289268-71296993 (+)
AKR/J MGP_AKRJ_G0015544
unclassified non-coding RNA gene Chr5:73605825-73614896 (+)
BALB/cJ MGP_BALBcJ_G0015542
unclassified non-coding RNA gene Chr5:71997888-72005741 (+)
C3H/HeJ MGP_C3HHeJ_G0015364
unclassified non-coding RNA gene Chr5:73996061-74004816 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015996
unclassified non-coding RNA gene Chr5:77098846-77106599 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013731
unclassified non-coding RNA gene Chr5:66956721-66964399 (+)
CAST/EiJ MGP_CASTEiJ_G0014920
unclassified non-coding RNA gene Chr5:73068895-73077146 (+)
CBA/J MGP_CBAJ_G0015345
unclassified non-coding RNA gene Chr5:79632015-79639759 (+)
DBA/2J MGP_DBA2J_G0015439
unclassified non-coding RNA gene Chr5:71358400-71366432 (+)
FVB/NJ MGP_FVBNJ_G0015446
unclassified non-coding RNA gene Chr5:70507619-70515328 (+)
LP/J MGP_LPJ_G0015520
unclassified non-coding RNA gene Chr5:74513973-74522857 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015469
unclassified non-coding RNA gene Chr5:82908084-82917841 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016038
unclassified non-coding RNA gene Chr5:73141325-73149146 (+)
PWK/PhJ MGP_PWKPhJ_G0014705
unclassified non-coding RNA gene Chr5:70332381-70340483 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014493
unclassified non-coding RNA gene Chr5:72493692-72499738 (+)
WSB/EiJ MGP_WSBEiJ_G0015024
unclassified non-coding RNA gene Chr5:73437882-73447223 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Usp46os2
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086234 Ensembl Gene Model | MGI Sequence Detail 7736 C57BL/6J ±  kb
transcript ENSMUST00000152787 Ensembl | MGI Sequence Detail 831 Not Applicable  
polypeptide Q9CRD1 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
Other
Accession IDs
less
MGI:1918434, MGI:3801998
References
more
  • Summaries
    All 31
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory