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6720427I07Rik Gene Detail
Summary
  • Symbol
    6720427I07Rik
  • Name
    RIKEN cDNA 6720427I07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924398
    NCBI Gene: 118568094
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:48686381-48699976 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    265 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924398
 lncRNA gene Chr13:48686381-48704244 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005461
 lincRNA gene Chr13:47429577-47431876 (-)
A/J MGP_AJ_G0005447
 lincRNA gene Chr13:45779064-45781363 (-)
AKR/J MGP_AKRJ_G0005426
 lincRNA gene Chr13:47061604-47063903 (-)
BALB/cJ MGP_BALBcJ_G0005428
 lincRNA gene Chr13:45991360-45993659 (-)
C3H/HeJ MGP_C3HHeJ_G0005376
 lincRNA gene Chr13:46891700-46893999 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005583
 lincRNA gene Chr13:48874149-48876448 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004960
 lincRNA gene Chr13:43779271-43781537 (-)
CAST/EiJ MGP_CASTEiJ_G0005319
 lincRNA gene Chr13:46873888-46876186 (-)
CBA/J MGP_CBAJ_G0005365
 lincRNA gene Chr13:50907584-50909883 (-)
DBA/2J MGP_DBA2J_G0005381
 lincRNA gene Chr13:45306532-45308831 (-)
FVB/NJ MGP_FVBNJ_G0005407
 lincRNA gene Chr13:44816934-44819233 (-)
LP/J MGP_LPJ_G0005464
 lincRNA gene Chr13:47671928-47674227 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005390
 lincRNA gene Chr13:50669086-50671385 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005583
 lincRNA gene Chr13:46742724-46745023 (-)
PWK/PhJ MGP_PWKPhJ_G0005268
 lincRNA gene Chr13:45463851-45466150 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005188
 lincRNA gene Chr13:45461045-45463335 (-)
WSB/EiJ MGP_WSBEiJ_G0005368
 lincRNA gene Chr13:47073815-47076114 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097375 Ensembl Gene Model | MGI Sequence Detail 13596 C57BL/6J ±  kb
transcript ENSMUST00000181490 Ensembl | MGI Sequence Detail 5598 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory