9430007M09Rik Gene Detail

Summary

• Symbol
  9430007M09Rik
• Name
  RIKEN cDNA 9430007M09 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1924520
  NCBI Gene: 77270
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:135293180-135293983 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924520	lncRNA gene	Chr5:135293180-135293983 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001816	unclassified gene	Chr5:139778762-139779565 (+)
A/J	MGP_AJ_G0001793	unclassified gene	Chr5:133796915-133797718 (+)
AKR/J	MGP_AKRJ_G0001780	unclassified gene	Chr5:138144368-138145171 (+)
BALB/cJ	MGP_BALBcJ_G0001790	unclassified gene	Chr5:135154257-135155060 (+)
C3H/HeJ	MGP_C3HHeJ_G0001767	unclassified gene	Chr5:138702558-138703361 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001911	unclassified gene	Chr5:145000902-145001705 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001575	unclassified gene	Chr5:128095786-128096593 (+)
CAST/EiJ	MGP_CASTEiJ_G0001738	unclassified gene	Chr5:138121986-138122791 (+)
CBA/J	MGP_CBAJ_G0001760	unclassified gene	Chr5:150681022-150681825 (+)
DBA/2J	MGP_DBA2J_G0001764	unclassified gene	Chr5:133694330-133695133 (+)
FVB/NJ	MGP_FVBNJ_G0001772	unclassified gene	Chr5:132831141-132831944 (+)
LP/J	MGP_LPJ_G0001819	unclassified gene	Chr5:140216872-140217675 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001753	unclassified gene	Chr5:153688240-153689043 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001900	unclassified gene	Chr5:137893114-137893917 (+)
PWK/PhJ	MGP_PWKPhJ_G0001698	unclassified gene	Chr5:132739670-132740503 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001664	unclassified gene	Chr5:135458557-135459354 (+)
WSB/EiJ	MGP_WSBEiJ_G0001760	unclassified gene	Chr5:138635103-138635907 (+)

Homology

• Gene Tree
  9430007M09Rik
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving 9430007M09Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106913 (Evidence)
• NCBI Gene
  77270

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106913	Ensembl Gene Model | MGI Sequence Detail	804	C57BL/6J
transcript	AK020407	GenBank | ENA | DDBJ | MGI Sequence Detail	805	C57BL/6J

Molecular
Reagents

• All nucleic 2

  Genomic 1

  cDNA 1

References

• Summaries
  All 19

  Diseases 2

  Phenotypes 11
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:337436 Abdalla N, et al., Dysfunctional Mitochondria in the Cardiac Fibers of a Williams-Beuren Syndrome Mouse Model. Int J Mol Sci. 2023 Jun 13;24(12)