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Ankrd55 Gene Detail
Summary
  • Symbol
    Ankrd55
  • Name
    ankyrin repeat domain 55
  • Synonyms
    C030011J08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924568
    NCBI Gene: 77318
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:112424985-112520536 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 63.73 cM, cytoband D2.2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924568
 protein coding gene Chr13:112424985-112523391 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020935
 protein coding gene Chr13:114830395-114931331 (+)
A/J MGP_AJ_G0020885
 protein coding gene Chr13:110253409-110348489 (+)
AKR/J MGP_AKRJ_G0020860
 protein coding gene Chr13:113583186-113678914 (+)
BALB/cJ MGP_BALBcJ_G0020885
 protein coding gene Chr13:110952948-111048063 (+)
C3H/HeJ MGP_C3HHeJ_G0020674
 protein coding gene Chr13:113379633-113476791 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021321
 protein coding gene Chr13:118258511-118359050 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018890
 protein coding gene Chr13:105555219-105652357 (+)
CAST/EiJ MGP_CASTEiJ_G0020194
 protein coding gene Chr13:112992466-113091383 (+)
CBA/J MGP_CBAJ_G0020636
 protein coding gene Chr13:122814460-122922401 (+)
DBA/2J MGP_DBA2J_G0020759
 protein coding gene Chr13:109973747-110068018 (+)
FVB/NJ MGP_FVBNJ_G0020743
 protein coding gene Chr13:108663898-108761457 (+)
LP/J MGP_LPJ_G0020835
 protein coding gene Chr13:114883047-114987373 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020771
 protein coding gene Chr13:123110143-123210015 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021357
 protein coding gene Chr13:113033761-113130468 (+)
PWK/PhJ MGP_PWKPhJ_G0019947
 protein coding gene Chr13:108706888-108802787 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019769
 protein coding gene Chr13:109344967-109446839 (+)
WSB/EiJ MGP_WSBEiJ_G0020251
 protein coding gene Chr13:113638824-113737809 (+)



Homology
more
  • Human Ortholog
    ANKRD55, ankyrin repeat domain 55
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD55, ankyrin repeat domain 55
  • Links
    NCBI Gene ID: 79722
    neXtProt AC: NX_Q3KP44
    UniProt: Q3KP44

  • Chr Location
    5q11.2; chr5:56099680-56233330 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    18
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049985 Ensembl Gene Model | MGI Sequence Detail 95552 C57BL/6J ±  kb
transcript ENSMUST00000022275 Ensembl | MGI Sequence Detail 2412 Not Applicable  
polypeptide ENSMUSP00000022275 Ensembl | MGI Sequence Detail 626 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000031759 ankyrin repeat domain-containing protein 55
    (term hierarchy)
  • InterPro Domains
    IPR002110 Ankyrin repeat
    IPR050776 Ankyrin Repeat and Cyclin-Dependent Kinase Inhibitor
    IPR036770 Ankyrin repeat-containing domain superfamily
  • GlyGen
    Q8BLD6 1 site, 1 N-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory