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C030013C21Rik Gene Detail
Summary
  • Symbol
    C030013C21Rik
  • Name
    RIKEN cDNA C030013C21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924667
    NCBI Gene: 77417
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:80398236-80399932 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 47.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    131 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924667
 lncRNA gene Chr11:80398236-80399932 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036895
 sense intronic lncRNA gene Chr11:81674461-81676143 (-)
A/J MGP_AJ_G0036883
 sense intronic lncRNA gene Chr11:78537071-78538762 (-)
AKR/J MGP_AKRJ_G0036830
 sense intronic lncRNA gene Chr11:80895120-80896800 (-)
BALB/cJ MGP_BALBcJ_G0036874
 sense intronic lncRNA gene Chr11:78936896-78938594 (-)
C3H/HeJ MGP_C3HHeJ_G0036559
 sense intronic lncRNA gene Chr11:80958218-80959921 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037387
 sense intronic lncRNA gene Chr11:84167163-84168855 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034447
 sense intronic lncRNA gene Chr11:75467900-75469639 (-)
CAST/EiJ MGP_CASTEiJ_G0035748
 sense intronic lncRNA gene Chr11:81435934-81437631 (-)
CBA/J MGP_CBAJ_G0036534
 sense intronic lncRNA gene Chr11:87861611-87863300 (-)
DBA/2J MGP_DBA2J_G0036711
 sense intronic lncRNA gene Chr11:78097285-78099058 (-)
FVB/NJ MGP_FVBNJ_G0036662
 sense intronic lncRNA gene Chr11:77665899-77667588 (-)
LP/J MGP_LPJ_G0036757
 sense intronic lncRNA gene Chr11:82199139-82200835 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036668
 sense intronic lncRNA gene Chr11:88130359-88132060 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037503
 sense intronic lncRNA gene Chr11:81163994-81165696 (-)
PWK/PhJ MGP_PWKPhJ_G0035442
 sense intronic lncRNA gene Chr11:78912769-78914539 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035253
 sense intronic lncRNA gene Chr11:80750343-80753002 (-)
WSB/EiJ MGP_WSBEiJ_G0035948
 sense intronic lncRNA gene Chr11:80990849-80992545 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 77417 NCBI Gene Model | MGI Sequence Detail 1697 C57BL/6J ±  kb
transcript NR_126552 RefSeq | MGI Sequence Detail 795 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory