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9530002B09Rik Gene Detail
Summary
  • Symbol
    9530002B09Rik
  • Name
    RIKEN cDNA 9530002B09 gene
  • Synonyms
    Aump, Vpp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924682
    NCBI Gene: 77432
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:122583068-122598922 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 57.24 cM, cytoband D1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924682
 protein coding gene Chr4:122583052-122598928 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028726
 protein coding gene Chr4:124083446-124096798 (+)
A/J MGP_AJ_G0028685
 protein coding gene Chr4:119227886-119243727 (+)
AKR/J MGP_AKRJ_G0028639
 protein coding gene Chr4:122432823-122452808 (+)
BALB/cJ MGP_BALBcJ_G0028708
 protein coding gene Chr4:119809394-119826814 (+)
C3H/HeJ MGP_C3HHeJ_G0028423
 protein coding gene Chr4:122571375-122586624 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029150
 protein coding gene Chr4:128875368-128892389 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027855
 protein coding gene Chr4:120188206-120203072 (-)
CBA/J MGP_CBAJ_G0028390
 protein coding gene Chr4:132142604-132161370 (+)
DBA/2J MGP_DBA2J_G0028537
 protein coding gene Chr4:119759862-119774878 (+)
FVB/NJ MGP_FVBNJ_G0028504
 protein coding gene Chr4:118358767-118372019 (+)
LP/J MGP_LPJ_G0028638
 protein coding gene Chr4:124337967-124359000 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028532
 protein coding gene Chr4:137113556-137129302 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029187
 protein coding gene Chr4:122814017-122832243 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0027935
 protein coding gene Chr4:122905482-122920689 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    3
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023263 Ensembl Gene Model | MGI Sequence Detail 15855 C57BL/6J ±  kb
transcript ENSMUST00000024032 Ensembl | MGI Sequence Detail 803 Not Applicable  
polypeptide ENSMUSP00000024032 Ensembl | MGI Sequence Detail 135 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory