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C030034I22Rik Gene Detail
Summary
  • Symbol
    C030034I22Rik
  • Name
    RIKEN cDNA C030034I22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924783
    NCBI Gene: 77533
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:69723442-69726188 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 40.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    281 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924783
 lncRNA gene Chr17:69723442-69728627 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005749
 lincRNA gene Chr17:71749717-71753939 (+)
A/J MGP_AJ_G0005736
 lincRNA gene Chr17:69583802-69588032 (+)
AKR/J MGP_AKRJ_G0005715
 lincRNA gene Chr17:70567612-70571842 (+)
BALB/cJ MGP_BALBcJ_G0005716
 lincRNA gene Chr17:69519150-69523380 (+)
C3H/HeJ MGP_C3HHeJ_G0005664
 lincRNA gene Chr17:71487215-71491445 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005876
 lincRNA gene Chr17:74344498-74348728 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005227
 lincRNA gene Chr17:65468533-65472847 (+)
CAST/EiJ MGP_CASTEiJ_G0005606
 lincRNA gene Chr17:71891390-71896589 (+)
CBA/J MGP_CBAJ_G0005652
 lincRNA gene Chr17:77440831-77445061 (+)
DBA/2J MGP_DBA2J_G0005670
 lincRNA gene Chr17:68296350-68300580 (+)
FVB/NJ MGP_FVBNJ_G0005696
 lincRNA gene Chr17:67768645-67772875 (+)
LP/J MGP_LPJ_G0005751
 lincRNA gene Chr17:72504988-72509210 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005681
 lincRNA gene Chr17:77380753-77384983 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005876
 lincRNA gene Chr17:71065680-71069901 (+)
PWK/PhJ MGP_PWKPhJ_G0005550
 lincRNA gene Chr17:67613401-67617642 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005468
 lincRNA gene Chr17:67780662-67784909 (+)
WSB/EiJ MGP_WSBEiJ_G0005658
 lincRNA gene Chr17:71819837-71824067 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 77533 NCBI Gene Model | MGI Sequence Detail 2747 C57BL/6J ±  kb
transcript NR_026848 RefSeq | MGI Sequence Detail 2747 C57BL/6  
polypeptide Q3TNQ2 UniProt | EBI | MGI Sequence Detail 83 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 15
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory