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C030037D09Rik Gene Detail
Summary
  • Symbol
    C030037D09Rik
  • Name
    RIKEN cDNA C030037D09 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924865
    NCBI Gene: 193280
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:88609469-88619398 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 54.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924865
 lncRNA gene Chr11:88609354-88619986 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005279
 lincRNA gene Chr11:90455113-90465973 (+)
A/J MGP_AJ_G0005264
 lincRNA gene Chr11:86941994-86953428 (+)
AKR/J MGP_AKRJ_G0005241
 lincRNA gene Chr11:89581066-89591759 (+)
BALB/cJ MGP_BALBcJ_G0005244
 lincRNA gene Chr11:87357261-87369642 (+)
C3H/HeJ MGP_C3HHeJ_G0005193
 lincRNA gene Chr11:89616740-89630516 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005396
 lincRNA gene Chr11:93198301-93210322 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004789
 lincRNA gene Chr11:83968520-83979419 (+)
CAST/EiJ MGP_CASTEiJ_G0005140
 lincRNA gene Chr11:90314048-90326471 (+)
CBA/J MGP_CBAJ_G0005183
 lincRNA gene Chr11:97172477-97185167 (+)
DBA/2J MGP_DBA2J_G0005200
 lincRNA gene Chr11:86497801-86509040 (+)
FVB/NJ MGP_FVBNJ_G0005225
 lincRNA gene Chr11:86004181-86014300 (+)
LP/J MGP_LPJ_G0005281
 lincRNA gene Chr11:90975625-90988456 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005208
 lincRNA gene Chr11:97118318-97135268 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005400
 lincRNA gene Chr11:89798067-89810411 (+)
PWK/PhJ MGP_PWKPhJ_G0005089
 lincRNA gene Chr11:87351343-87361467 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005011
 lincRNA gene Chr11:89380517-89390744 (+)
WSB/EiJ MGP_WSBEiJ_G0005188
 lincRNA gene Chr11:89695886-89708343 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    6
  • Targeted
    3
  • Genomic Mutations
    4 involving C030037D09Rik
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    8
  • cDNA Data
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 193280 NCBI Gene Model | MGI Sequence Detail 9930 C57BL/6J ±  kb
transcript NR_038058 RefSeq | MGI Sequence Detail 1056 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 9
    cDNA 8
    Primer pair 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory