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C030047K22Rik Gene Detail
Summary
  • Symbol
    C030047K22Rik
  • Name
    RIKEN cDNA C030047K22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924868
    NCBI Gene: 77618
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr15:18697770-18818860 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 8.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3929 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924868
 lncRNA gene Chr15:18697369-18818911 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015291
 unclassified non-coding RNA gene Chr15:16297125-16419275 (-)
A/J MGP_AJ_G0015265
 unclassified non-coding RNA gene Chr15:15725495-15855104 (-)
AKR/J MGP_AKRJ_G0015228
 unclassified non-coding RNA gene Chr15:16124573-16242617 (-)
BALB/cJ MGP_BALBcJ_G0015229
 unclassified non-coding RNA gene Chr15:15723425-15848966 (-)
C3H/HeJ MGP_C3HHeJ_G0015053
 unclassified non-coding RNA gene Chr15:16127728-16256969 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015684
 unclassified non-coding RNA gene Chr15:16992954-17104863 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013425
 unclassified non-coding RNA gene Chr15:14772678-14878668 (-)
CAST/EiJ MGP_CASTEiJ_G0014604
 unclassified non-coding RNA gene Chr15:16462946-16592521 (-)
CBA/J MGP_CBAJ_G0015033
 unclassified non-coding RNA gene Chr15:17602672-17742050 (-)
DBA/2J MGP_DBA2J_G0015127
 unclassified non-coding RNA gene Chr15:15569198-15683343 (-)
FVB/NJ MGP_FVBNJ_G0015134
 unclassified non-coding RNA gene Chr15:15268069-15384851 (-)
LP/J MGP_LPJ_G0015207
 unclassified non-coding RNA gene Chr15:16219965-16348351 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015160
 unclassified non-coding RNA gene Chr15:19020089-19180847 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015723
 unclassified non-coding RNA gene Chr15:16245818-16368289 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0014183
 unclassified non-coding RNA gene Chr15:16113511-16234984 (-)
WSB/EiJ MGP_WSBEiJ_G0014711
 unclassified non-coding RNA gene Chr15:16151673-16291180 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084873 Ensembl Gene Model | MGI Sequence Detail 121091 C57BL/6J ±  kb
transcript ENSMUST00000150382 Ensembl | MGI Sequence Detail 1164 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 4
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory