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Grifin Gene Detail
Summary
  • Symbol
    Grifin
  • Name
    galectin-related inter-fiber protein
  • Synonyms
    E130101O17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925248
    NCBI Gene: 77998
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:140548874-140550826 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 79.10 cM, cytoband G1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    155 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925248
 protein coding gene Chr5:140548872-140553280 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030301
 protein coding gene Chr5:145662761-145664707 (-)
A/J MGP_AJ_G0030270
 protein coding gene Chr5:139443901-139445847 (-)
AKR/J MGP_AKRJ_G0030202
 protein coding gene Chr5:143801650-143803568 (-)
BALB/cJ MGP_BALBcJ_G0030287
 protein coding gene Chr5:140691532-140693506 (-)
C3H/HeJ MGP_C3HHeJ_G0029998
 protein coding gene Chr5:144596567-144599626 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030732
 protein coding gene Chr5:151048663-151050615 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027950
 protein coding gene Chr5:133278369-133280366 (-)
CAST/EiJ MGP_CASTEiJ_G0029403
 protein coding gene Chr5:144020590-144022441 (-)
CBA/J MGP_CBAJ_G0029968
 protein coding gene Chr5:157252284-157254236 (-)
DBA/2J MGP_DBA2J_G0030118
 protein coding gene Chr5:139256104-139258050 (-)
FVB/NJ MGP_FVBNJ_G0030073
 protein coding gene Chr5:138409248-138411581 (-)
LP/J MGP_LPJ_G0030204
 protein coding gene Chr5:146267066-146269019 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030104
 protein coding gene Chr5:159841384-159843330 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030772
 protein coding gene Chr5:143643654-143645611 (-)
PWK/PhJ MGP_PWKPhJ_G0029118
 protein coding gene Chr5:138279600-138281558 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028954
 protein coding gene Chr5:141344616-141346471 (-)
WSB/EiJ MGP_WSBEiJ_G0029477
 protein coding gene Chr5:144424313-144426274 (-)



Homology
more
  • Human Ortholog
    GRIFIN, galectin-related inter-fiber protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GRIFIN, galectin-related inter-fiber protein
  • Links
    NCBI Gene ID: 402635
    UniProt: A4D1Z8

  • Chr Location
    7p22.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    4
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036586 Ensembl Gene Model | MGI Sequence Detail 1953 C57BL/6J ±  kb
transcript ENSMUST00000042993 Ensembl | MGI Sequence Detail 613 Not Applicable  
polypeptide ENSMUSP00000039263 Ensembl | MGI Sequence Detail 144 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:71329 Ogden AT, et al., GRIFIN, a novel lens-specific protein related to the galectin family. J Biol Chem. 1998 Oct 30;273(44):28889-96
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory