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4833413E03Rik Gene Detail
Summary
  • Symbol
    4833413E03Rik
  • Name
    RIKEN cDNA 4833413E03 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925354
    NCBI Gene: 78104
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:31776100-31778087 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 16.76 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    171 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925354
 lncRNA gene Chr17:31776100-31778087 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005716
 lincRNA gene Chr17:31340700-31342687 (+)
A/J MGP_AJ_G0005705
 lincRNA gene Chr17:30306002-30307989 (+)
AKR/J MGP_AKRJ_G0005684
 lincRNA gene Chr17:30572985-30574972 (+)
BALB/cJ MGP_BALBcJ_G0005685
 lincRNA gene Chr17:30400401-30402388 (+)
C3H/HeJ MGP_C3HHeJ_G0005632
 lincRNA gene Chr17:30947580-30949567 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005843
 lincRNA gene Chr17:32418442-32420429 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005196
 lincRNA gene Chr17:27431184-27433165 (+)
CAST/EiJ MGP_CASTEiJ_G0005574
 lincRNA gene Chr17:30998311-31000256 (+)
CBA/J MGP_CBAJ_G0005620
 lincRNA gene Chr17:33829182-33831169 (+)
DBA/2J MGP_DBA2J_G0005638
 lincRNA gene Chr17:29705019-29707006 (+)
FVB/NJ MGP_FVBNJ_G0005664
 lincRNA gene Chr17:29501068-29503055 (+)
LP/J MGP_LPJ_G0005719
 lincRNA gene Chr17:31563742-31565729 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005649
 lincRNA gene Chr17:32912720-32914707 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005843
 lincRNA gene Chr17:30937733-30939720 (+)
PWK/PhJ MGP_PWKPhJ_G0005520
 lincRNA gene Chr17:28574750-28576742 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005439
 lincRNA gene Chr17:28931953-28933937 (+)
WSB/EiJ MGP_WSBEiJ_G0005626
 lincRNA gene Chr17:30901065-30903052 (+)



Homology
less
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000013562 Ensembl Gene Model | MGI Sequence Detail 1988 C57BL/6J ±  kb
transcript ENSMUST00000162059 Ensembl | MGI Sequence Detail 1092 Not Applicable  
polypeptide Q9D2L2 UniProt | EBI | MGI Sequence Detail 104 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 35
    Diseases 3
    Phenotypes 24
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:351211 Wu Y, et al., Cathepsin B abundance, activity and microglial localisation in Alzheimer's disease-Down syndrome and early onset Alzheimer's disease; the role of elevated cystatin B. Acta Neuropathol Commun. 2023 Aug 14;11(1):132
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory