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6030471H07Rik Gene Detail
Summary
  • Symbol
    6030471H07Rik
  • Name
    RIKEN cDNA 6030471H07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925488
    NCBI Gene: 78238
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:83960277-83963116 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 39.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925488
 lncRNA gene Chr4:83960276-83963116 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006455
 lincRNA gene Chr4:83645100-83647940 (-)
A/J MGP_AJ_G0006447
 lincRNA gene Chr4:80735931-80738771 (-)
AKR/J MGP_AKRJ_G0006421
 lincRNA gene Chr4:82837118-82839958 (-)
BALB/cJ MGP_BALBcJ_G0006421
 lincRNA gene Chr4:80976462-80979302 (-)
C3H/HeJ MGP_C3HHeJ_G0006371
 lincRNA gene Chr4:83452911-83455751 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006587
 lincRNA gene Chr4:86950309-86953149 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005872
 lincRNA gene Chr4:76704779-76707891 (-)
CAST/EiJ MGP_CASTEiJ_G0006304
 lincRNA gene Chr4:81359669-81362509 (-)
CBA/J MGP_CBAJ_G0006354
 lincRNA gene Chr4:89598326-89601166 (-)
DBA/2J MGP_DBA2J_G0006376
 lincRNA gene Chr4:80530502-80533342 (-)
FVB/NJ MGP_FVBNJ_G0006398
 lincRNA gene Chr4:79529855-79532695 (-)
LP/J MGP_LPJ_G0006457
 lincRNA gene Chr4:84017790-84020630 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006385
 lincRNA gene Chr4:94714596-94717436 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006591
 lincRNA gene Chr4:82896060-82898900 (-)
PWK/PhJ MGP_PWKPhJ_G0006241
 lincRNA gene Chr4:78883750-78886588 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006153
 lincRNA gene Chr4:80447418-80449631 (-)
WSB/EiJ MGP_WSBEiJ_G0006350
 lincRNA gene Chr4:83065810-83068650 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving 6030471H07Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78238 NCBI Gene Model | MGI Sequence Detail 2840 C57BL/6J ±  kb
transcript NR_130998 RefSeq | MGI Sequence Detail 491 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory