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5330434G04Rik Gene Detail
Summary
  • Symbol
    5330434G04Rik
  • Name
    RIKEN cDNA 5330434G04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925519
    NCBI Gene: 100043213
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:104416600-104435360 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 46.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    372 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925519
 lncRNA gene ChrX:104385101-104435437 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007558
 lincRNA gene ChrX:102115054-102157058 (-)
A/J MGP_AJ_G0007557
 lincRNA gene ChrX:101923447-101971068 (-)
AKR/J MGP_AKRJ_G0007527
 lincRNA gene ChrX:105136750-105184321 (-)
BALB/cJ MGP_BALBcJ_G0007531
 lincRNA gene ChrX:100754613-100798558 (-)
C3H/HeJ MGP_C3HHeJ_G0007478
 lincRNA gene ChrX:102554454-102611562 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007704
 lincRNA gene ChrX:105045369-105091764 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006881
 lincRNA gene ChrX:99441968-99483258 (-)
CAST/EiJ MGP_CASTEiJ_G0007380
 lincRNA gene ChrX:86736814-86781993 (-)
CBA/J MGP_CBAJ_G0007459
 lincRNA gene ChrX:108354429-108402797 (-)
DBA/2J MGP_DBA2J_G0007484
 lincRNA gene ChrX:101210281-101252839 (-)
FVB/NJ MGP_FVBNJ_G0007500
 lincRNA gene ChrX:100508694-100551584 (-)
LP/J MGP_LPJ_G0007564
 lincRNA gene ChrX:103075151-103119929 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007479
 lincRNA gene ChrX:113020233-113068091 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007707
 lincRNA gene ChrX:101773383-101820679 (-)
PWK/PhJ MGP_PWKPhJ_G0007317
 lincRNA gene ChrX:84264729-84309656 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007222
 lincRNA gene ChrX:87448384-87491976 (-)
WSB/EiJ MGP_WSBEiJ_G0007441
 lincRNA gene ChrX:100472215-100519785 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    36
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043213 NCBI Gene Model | MGI Sequence Detail 18761 C57BL/6J ±  kb
transcript NR_015552 RefSeq | MGI Sequence Detail 3449 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:3782475
References
more
  • Summaries
    All 14
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory