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Prr9 Gene Detail
Summary
  • Symbol
    Prr9
  • Name
    proline rich 9
  • Synonyms
    A030004J04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925680
    NCBI Gene: 109314
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92029511-92031254 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925680
 protein coding gene Chr3:92029511-92031254 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027486
 protein coding gene Chr3:92545063-92546778 (-)
A/J MGP_AJ_G0027450
 protein coding gene Chr3:89592330-89594071 (-)
AKR/J MGP_AKRJ_G0027415
 protein coding gene Chr3:91745245-91746968 (-)
BALB/cJ MGP_BALBcJ_G0027459
 protein coding gene Chr3:89436190-89437903 (-)
C3H/HeJ MGP_C3HHeJ_G0027201
 protein coding gene Chr3:91958879-91960600 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027905
 protein coding gene Chr3:96079892-96081674 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025256
 protein coding gene Chr3:86284431-86286226 (-)
CAST/EiJ MGP_CASTEiJ_G0026646
 protein coding gene Chr3:91310982-91312694 (-)
CBA/J MGP_CBAJ_G0027176
 protein coding gene Chr3:99361676-99363389 (-)
DBA/2J MGP_DBA2J_G0027313
 protein coding gene Chr3:88959564-88961295 (-)
FVB/NJ MGP_FVBNJ_G0027281
 protein coding gene Chr3:87130996-87132741 (-)
LP/J MGP_LPJ_G0027422
 protein coding gene Chr3:93785223-93786982 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027302
 protein coding gene Chr3:105610605-105612331 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027964
 protein coding gene Chr3:91469567-91471382 (-)
PWK/PhJ MGP_PWKPhJ_G0026380
 protein coding gene Chr3:88900706-88902483 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026200
 protein coding gene Chr3:89887174-89888871 (-)
WSB/EiJ MGP_WSBEiJ_G0026728
 protein coding gene Chr3:91836182-91837930 (-)



Homology
more
  • Human Ortholog
    PRR9, proline rich 9
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRR9, proline rich 9
  • Links
    NCBI Gene ID: 574414
    neXtProt AC: NX_Q5T870
    UniProt: Q5T870

  • Chr Location
    1q21.3; chr1:153217584-153219310 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    3
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Prr9
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    7 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    2
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 109314 NCBI Gene Model | MGI Sequence Detail 1744 C57BL/6J ±  kb
transcript NM_175424 RefSeq | MGI Sequence Detail 1183 C57BL/6  
polypeptide Q8BV84 UniProt | EBI | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory