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1700054A03Rik Gene Detail
Summary
  • Symbol
    1700054A03Rik
  • Name
    RIKEN cDNA 1700054A03 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925707
    NCBI Gene: 78457
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:53064683-53072823 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    400 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925707
 lncRNA gene Chr19:53022079-53072947 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005842
 lincRNA gene Chr19:53194740-53202922 (+)
A/J MGP_AJ_G0005834
 lincRNA gene Chr19:50556431-50564593 (+)
AKR/J MGP_AKRJ_G0005809
 lincRNA gene Chr19:52164743-52172915 (+)
BALB/cJ MGP_BALBcJ_G0005813
 lincRNA gene Chr19:50648145-50656327 (+)
C3H/HeJ MGP_C3HHeJ_G0005760
 lincRNA gene Chr19:52358442-52366609 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005973
 lincRNA gene Chr19:54487522-54495690 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005312
 lincRNA gene Chr19:49560357-49568381 (+)
CAST/EiJ MGP_CASTEiJ_G0005697
 lincRNA gene Chr19:52316136-52324023 (+)
CBA/J MGP_CBAJ_G0005745
 lincRNA gene Chr19:57139317-57147482 (+)
DBA/2J MGP_DBA2J_G0005766
 lincRNA gene Chr19:50371118-50382352 (+)
FVB/NJ MGP_FVBNJ_G0005792
 lincRNA gene Chr19:50085315-50093484 (+)
LP/J MGP_LPJ_G0005846
 lincRNA gene Chr19:53045176-53053356 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005779
 lincRNA gene Chr19:56625643-56633808 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005970
 lincRNA gene Chr19:52342048-52350232 (+)
PWK/PhJ MGP_PWKPhJ_G0005646
 lincRNA gene Chr19:50287490-50295470 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005559
 lincRNA gene Chr19:51030528-51038717 (+)
WSB/EiJ MGP_WSBEiJ_G0005750
 lincRNA gene Chr19:52479480-52487655 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 78457 NCBI Gene Model | MGI Sequence Detail 8141 C57BL/6J ±  kb
transcript NR_045320 RefSeq | MGI Sequence Detail 780 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 14
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory