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1700104B16Rik Gene Detail
Summary
  • Symbol
    1700104B16Rik
  • Name
    RIKEN cDNA 1700104B16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925886
    NCBI Gene: 115486865
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:34220562-34221847 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 20.79 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    169 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925886
 lncRNA gene Chr8:34220562-34222515 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007315
 lincRNA gene Chr8:32188805-32190083 (-)
A/J MGP_AJ_G0007313
 lincRNA gene Chr8:30960001-30961279 (-)
AKR/J MGP_AKRJ_G0007284
 lincRNA gene Chr8:31926691-31927982 (-)
BALB/cJ MGP_BALBcJ_G0007291
 lincRNA gene Chr8:31081363-31082641 (-)
C3H/HeJ MGP_C3HHeJ_G0007234
 lincRNA gene Chr8:32247490-32252503 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007461
 lincRNA gene Chr8:33429718-33431003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006659
 lincRNA gene Chr8:27963050-27964340 (-)
CAST/EiJ MGP_CASTEiJ_G0007137
 lincRNA gene Chr8:31691722-31692999 (-)
CBA/J MGP_CBAJ_G0007217
 lincRNA gene Chr8:34735515-34736831 (-)
DBA/2J MGP_DBA2J_G0007239
 lincRNA gene Chr8:30938302-30939625 (-)
FVB/NJ MGP_FVBNJ_G0007260
 lincRNA gene Chr8:30602011-30603296 (-)
LP/J MGP_LPJ_G0007320
 lincRNA gene Chr8:32154204-32156340 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007237
 lincRNA gene Chr8:34270119-34271394 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007463
 lincRNA gene Chr8:32017101-32018386 (-)
PWK/PhJ MGP_PWKPhJ_G0007078
 lincRNA gene Chr8:30454726-30456035 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006986
 lincRNA gene Chr8:31282556-31283843 (-)
WSB/EiJ MGP_WSBEiJ_G0007196
 lincRNA gene Chr8:32145682-32150387 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049476 Ensembl Gene Model | MGI Sequence Detail 1286 C57BL/6J ±  kb
transcript ENSMUST00000187948 Ensembl | MGI Sequence Detail 722 Not Applicable  
polypeptide Q9D2S2 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory