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C030005K06Rik Gene Detail
Summary
  • Symbol
    C030005K06Rik
  • Name
    RIKEN cDNA C030005K06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925945
    NCBI Gene: 102635912
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:50175797-50186911 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 27.20 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    436 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925945
 lncRNA gene Chr18:50174680-50186911 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015365
 unclassified non-coding RNA gene Chr18:49060656-49071727 (-)
A/J MGP_AJ_G0015339
 unclassified non-coding RNA gene Chr18:47205680-47216751 (-)
AKR/J MGP_AKRJ_G0015303
 unclassified non-coding RNA gene Chr18:48515194-48526265 (-)
BALB/cJ MGP_BALBcJ_G0015303
 unclassified non-coding RNA gene Chr18:47336029-47347088 (-)
C3H/HeJ MGP_C3HHeJ_G0015127
 unclassified non-coding RNA gene Chr18:48645252-48656311 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015757
 unclassified non-coding RNA gene Chr18:50700815-50711913 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013498
 unclassified non-coding RNA gene Chr18:46906781-46917864 (-)
CAST/EiJ MGP_CASTEiJ_G0014678
 unclassified non-coding RNA gene Chr18:48620577-48631661 (-)
CBA/J MGP_CBAJ_G0015106
 unclassified non-coding RNA gene Chr18:52177872-52188931 (-)
DBA/2J MGP_DBA2J_G0015201
 unclassified non-coding RNA gene Chr18:46847073-46858132 (-)
FVB/NJ MGP_FVBNJ_G0015208
 unclassified non-coding RNA gene Chr18:46396548-46407599 (-)
LP/J MGP_LPJ_G0015281
 unclassified non-coding RNA gene Chr18:49079034-49090105 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015234
 unclassified non-coding RNA gene Chr18:53707949-53719008 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015796
 unclassified non-coding RNA gene Chr18:48479214-48490285 (-)
PWK/PhJ MGP_PWKPhJ_G0014468
 unclassified non-coding RNA gene Chr18:46975530-46986732 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014255
 unclassified non-coding RNA gene Chr18:48705902-48718255 (-)
WSB/EiJ MGP_WSBEiJ_G0014785
 unclassified non-coding RNA gene Chr18:48369622-48380695 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086600 Ensembl Gene Model | MGI Sequence Detail 11115 C57BL/6J ±  kb
transcript ENSMUST00000129164 Ensembl | MGI Sequence Detail 2076 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory