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4930562C15Rik Gene Detail
Summary
  • Symbol
    4930562C15Rik
  • Name
    RIKEN cDNA 4930562C15 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926059
    NCBI Gene: 78809
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:4653280-4685550 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 2.47 cM, cytoband A1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    671 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926059
 protein coding gene Chr16:4653280-4685555 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022473
 protein coding gene Chr16:1347696-1378904 (+)
A/J MGP_AJ_G0022435
 protein coding gene Chr16:1164386-1195307 (+)
AKR/J MGP_AKRJ_G0022412
 protein coding gene Chr16:1357553-1387164 (+)
BALB/cJ MGP_BALBcJ_G0022440
 protein coding gene Chr16:1311394-1349402 (+)
C3H/HeJ MGP_C3HHeJ_G0022207
 protein coding gene Chr16:1378994-1409384 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022889
 protein coding gene Chr16:1433135-1465015 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020410
 protein coding gene Chr16:1094771-1124258 (+)
CAST/EiJ MGP_CASTEiJ_G0021733
 protein coding gene Chr16:1378325-1409596 (+)
CBA/J MGP_CBAJ_G0022176
 protein coding gene Chr16:1510180-1546660 (+)
DBA/2J MGP_DBA2J_G0022307
 protein coding gene Chr16:1271159-1300933 (+)
FVB/NJ MGP_FVBNJ_G0022282
 protein coding gene Chr16:1257983-1288502 (+)
LP/J MGP_LPJ_G0022375
 protein coding gene Chr16:1342293-1373732 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022304
 protein coding gene Chr16:1373348-1404262 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022901
 protein coding gene Chr16:1331515-1362024 (+)
PWK/PhJ MGP_PWKPhJ_G0021473
 protein coding gene Chr16:1336301-1366715 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021304
 protein coding gene Chr16:1422908-1452542 (+)
WSB/EiJ MGP_WSBEiJ_G0021782
 protein coding gene Chr16:1341950-1373965 (+)



Homology
more
  • Human Ortholog
    C16orf96, chromosome 16 open reading frame 96
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C16orf96, chromosome 16 open reading frame 96
  • Links
    NCBI Gene ID: 342346
    neXtProt AC: NX_A6NNT2
    UniProt: A6NNT2

  • Chr Location
    16p13.3; chr16:4538601-4600758 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022518 Ensembl Gene Model | MGI Sequence Detail 32271 C57BL/6J ±  kb
transcript ENSMUST00000100211 Ensembl | MGI Sequence Detail 3824 Not Applicable  
polypeptide ENSMUSP00000097784 Ensembl | MGI Sequence Detail 1145 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    Genomic 2
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 20
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory