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Ms4a4c Gene Detail
Summary
  • Symbol
    Ms4a4c
  • Name
    membrane-spanning 4-domains, subfamily A, member 4C
  • Synonyms
    5830413L19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927656
    NCBI Gene: 64380
  • Member of
    Ms4ac cluster
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:11382134-11404610 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 8.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    625 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1927656
 protein coding gene Chr19:11382081-11404610 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024878
 protein coding gene Chr19:8795459-8817479 (+)
A/J MGP_AJ_G0024846
 protein coding gene Chr19:8229462-8249203 (+)
AKR/J MGP_AKRJ_G0024821
 protein coding gene Chr19:8535707-8564663 (+)
BALB/cJ MGP_BALBcJ_G0024846
 protein coding gene Chr19:8260550-8286768 (+)
C3H/HeJ MGP_C3HHeJ_G0024612
 protein coding gene Chr19:8421188-8434329 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025294
 protein coding gene Chr19:9186485-9208542 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022721
 protein coding gene Chr19:8624936-8998890 (+)
CAST/EiJ MGP_CASTEiJ_G0024085
 protein coding gene Chr19:8093274-8111649 (+)
CBA/J MGP_CBAJ_G0024586
 protein coding gene Chr19:9255662-9285247 (+)
DBA/2J MGP_DBA2J_G0024713
 protein coding gene Chr19:8218204-8265468 (+)
FVB/NJ MGP_FVBNJ_G0024680
 protein coding gene Chr19:8246526-8271612 (+)
LP/J MGP_LPJ_G0024800
 protein coding gene Chr19:8754281-8776918 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024707
 protein coding gene Chr19:9134557-9165800 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025342
 protein coding gene Chr19:8565473-8588944 (+)
PWK/PhJ MGP_PWKPhJ_G0023829
 protein coding gene Chr19:7674882-7801207 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023636
 protein coding gene Chr19:7779126-7900797 (+)
WSB/EiJ MGP_WSBEiJ_G0024147
 protein coding gene Chr19:8458884-8484146 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024675 Ensembl Gene Model | MGI Sequence Detail 22477 C57BL/6J ±  kb
transcript ENSMUST00000072729 Ensembl | MGI Sequence Detail 1723 Not Applicable  
polypeptide ENSMUSP00000072512 Ensembl | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR007237 CD20-like family
    IPR030417 Membrane-spanning 4-domains subfamily A
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
Other
Accession IDs
less
MGI:1923261, MGI:2147541
References
more
  • Summaries
    All 28
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory