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Ap3s1-ps1 Pseudogene Detail
Summary
  • Symbol
    Ap3s1-ps1
  • Name
    adaptor-related protein complex 3, sigma 1 subunit, pseudogene 1
  • Synonyms
    Ap3s1-rs1
  • Feature Type
    pseudogene
  • IDs
    MGI:1929216
    NCBI Gene: 665369
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:37774469-37775047 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 22.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1929216
 pseudogene ChrX:37773854-37775172 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014367
 pseudogene ChrX:33674708-33675218 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0011263
 pseudogene Chr17:4418403-4418979 (-)
BALB/cJ MGP_BALBcJ_G0014326
 pseudogene ChrX:33413168-33413739 (-)
C3H/HeJ MGP_C3HHeJ_G0013904
 pseudogene Chr8:95320987-95321589 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0010145
 pseudogene Chr17:3602782-3603353 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0013886
 pseudogene Chr8:102609046-102609632 (+)
DBA/2J MGP_DBA2J_G0013964
 pseudogene Chr8:91557539-91558169 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0013993
 pseudogene Chr8:104916088-104916683 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014758
 pseudogene ChrX:33704278-33704803 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0010686
 pseudogene Chr17:4056749-4057314 (-)
WSB/EiJ MGP_WSBEiJ_G0011030
 pseudogene Chr17:5268855-5269431 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085611 Ensembl Gene Model | MGI Sequence Detail 579 C57BL/6J ±  kb
transcript ENSMUST00000117113 Ensembl | MGI Sequence Detail 579 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:3647499
References
more
  • Summaries
    All 6
  • Earliest
    J:61187 Gwynn B, et al., Defects in the cappuccino (cno) gene on mouse chromosome 5 and human 4p cause Hermansky-Pudlak syndrome by an AP-3-independent mechanism. Blood. 2000 Dec 15;96(13):4227-35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory