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Btnl5-ps Pseudogene Detail
Summary
  • Symbol
    Btnl5-ps
  • Name
    butyrophilin-like 5, pseudogene
  • Synonyms
    Btnl5, ENSMUSG00000073420, NG12
  • Feature Type
    pseudogene
  • IDs
    MGI:1932037
    NCBI Gene: 81497
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34707044-34714978 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1932037
 pseudogene Chr17:34706379-34716403 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039805
 pseudogene Chr17:34491661-34578000 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0039731
 pseudogene Chr17:33734030-33743401 (-)
BALB/cJ MGP_BALBcJ_G0039778
 pseudogene Chr17:33487638-33497025 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040343
 pseudogene Chr17:35793923-35846917 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036954
 pseudogene Chr17:31321670-31329578 (-)
CAST/EiJ MGP_CASTEiJ_G0038545
 pseudogene Chr17:34231455-34276275 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0039603
 pseudogene Chr17:32671689-32681636 (-)
FVB/NJ MGP_FVBNJ_G0039561
 pseudogene Chr17:32543301-32552703 (-)
LP/J MGP_LPJ_G0039638
 pseudogene Chr17:34784970-34793257 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039562
 pseudogene Chr17:36263358-36274148 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0037968
 pseudogene Chr17:31997151-32022884 (-)
WSB/EiJ MGP_WSBEiJ_G0038780
 pseudogene Chr17:34122710-34203176 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073420 Ensembl Gene Model | MGI Sequence Detail 7935 C57BL/6J ±  kb
transcript ENSMUST00000097346 Ensembl | MGI Sequence Detail 1751 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 3
Other
Accession IDs
less
MGI:3642782
References
more
  • Summaries
    All 8
    Phenotypes 1
  • Earliest
    J:61935 Stammers M, et al., BTL-II: a polymorphic locus with homology to the butyrophilin gene family, located at the border of the major histocompatibility complex class II and class III regions in human and mouse. Immunogenetics. 2000 Apr;51(4-5):373-82
  • Latest
    J:291989 Jandke A, et al., Butyrophilin-like proteins display combinatorial diversity in selecting and maintaining signature intraepithelial gammadelta T cell compartments. Nat Commun. 2020 Jul 28;11(1):3769
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory