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Sh3bp5l Gene Detail
Summary
  • Symbol
    Sh3bp5l
  • Name
    SH3 binding domain protein 5 like
  • Synonyms
    2310074E09Rik, MGC:7813
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933124
    NCBI Gene: 79566
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58221550-58238554 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 36.19 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    498 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933124
 protein coding gene Chr11:58221533-58238554 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018350
 protein coding gene Chr11:58020965-58045163 (+)
A/J MGP_AJ_G0018320
 protein coding gene Chr11:55819411-55837086 (+)
AKR/J MGP_AKRJ_G0018289
 protein coding gene Chr11:57646782-57663606 (+)
BALB/cJ MGP_BALBcJ_G0018291
 protein coding gene Chr11:56158044-56174754 (+)
C3H/HeJ MGP_C3HHeJ_G0018102
 protein coding gene Chr11:57594295-57612280 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018742
 protein coding gene Chr11:59811752-59829800 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016392
 protein coding gene Chr11:53167627-53184843 (+)
CAST/EiJ MGP_CASTEiJ_G0017667
 protein coding gene Chr11:57686362-57707822 (+)
CBA/J MGP_CBAJ_G0018077
 protein coding gene Chr11:62566032-62588832 (+)
DBA/2J MGP_DBA2J_G0018186
 protein coding gene Chr11:55470847-55488063 (+)
FVB/NJ MGP_FVBNJ_G0018177
 protein coding gene Chr11:55156013-55174892 (+)
LP/J MGP_LPJ_G0018261
 protein coding gene Chr11:58567664-58586507 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018203
 protein coding gene Chr11:63667644-63686630 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018785
 protein coding gene Chr11:57702271-57720066 (+)
PWK/PhJ MGP_PWKPhJ_G0017439
 protein coding gene Chr11:56072392-56091559 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017234
 protein coding gene Chr11:57582998-57602989 (+)
WSB/EiJ MGP_WSBEiJ_G0017714
 protein coding gene Chr11:57331046-57348211 (+)



Homology
more
  • Human Ortholog
    SH3BP5L, SH3 binding domain protein 5 like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SH3BP5L, SH3 binding domain protein 5 like
  • Links
    NCBI Gene ID: 80851
    neXtProt AC: NX_Q7L8J4
    UniProt: Q7L8J4

  • Chr Location
    1q44; chr1:248810446-248825915 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    87
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000013646 Ensembl Gene Model | MGI Sequence Detail 17005 C57BL/6J ±  kb
transcript ENSMUST00000116376 Ensembl | MGI Sequence Detail 3016 Not Applicable  
polypeptide ENSMUSP00000112077 Ensembl | MGI Sequence Detail 392 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 87
    cDNA 87

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923712
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory