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Emc9 Gene Detail
Summary
  • Symbol
    Emc9
  • Name
    ER membrane protein complex subunit 9
  • Synonyms
    1500005A01Rik, Cgi112, Fam158a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1934682
    NCBI Gene: 85308
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:55818973-55822759 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 28.19 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    146 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1934682
 protein coding gene Chr14:55818973-55822832 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021352
 protein coding gene Chr14:49616659-49621817 (-)
A/J MGP_AJ_G0021311
 protein coding gene Chr14:48627936-48633140 (-)
AKR/J MGP_AKRJ_G0021287
 protein coding gene Chr14:50374015-50379244 (-)
BALB/cJ MGP_BALBcJ_G0021315
 protein coding gene Chr14:48574314-48579115 (-)
C3H/HeJ MGP_C3HHeJ_G0021095
 protein coding gene Chr14:50060617-50064373 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021753
 protein coding gene Chr14:52112226-52116130 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019300
 protein coding gene Chr14:47003115-47007308 (-)
CAST/EiJ MGP_CASTEiJ_G0020614
 protein coding gene Chr14:46325244-46329018 (-)
CBA/J MGP_CBAJ_G0021062
 protein coding gene Chr14:53666371-53670027 (-)
DBA/2J MGP_DBA2J_G0021183
 protein coding gene Chr14:48354107-48358112 (-)
FVB/NJ MGP_FVBNJ_G0021165
 protein coding gene Chr14:47802660-47806389 (-)
LP/J MGP_LPJ_G0021257
 protein coding gene Chr14:50661063-50665407 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021189
 protein coding gene Chr14:53028161-53033068 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021780
 protein coding gene Chr14:49562808-49566546 (-)
PWK/PhJ MGP_PWKPhJ_G0020361
 protein coding gene Chr14:44885659-44889731 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020189
 protein coding gene Chr14:45566404-45570066 (-)
WSB/EiJ MGP_WSBEiJ_G0020667
 protein coding gene Chr14:49846455-49851741 (-)



Homology
more
  • Human Ortholog
    EMC9, ER membrane protein complex subunit 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    EMC9, ER membrane protein complex subunit 9
  • Synonyms
    C14orf122, CGI-112, FAM158A
  • Links
    NCBI Gene ID: 51016
    neXtProt AC: NX_Q9Y3B6
    UniProt: Q9Y3B6

  • Chr Location
    14q12
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving Emc9
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    6 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    12
  • cDNA Data
    24
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022217 Ensembl Gene Model | MGI Sequence Detail 3787 C57BL/6J ±  kb
transcript ENSMUST00000022828 Ensembl | MGI Sequence Detail 855 Not Applicable  
polypeptide ENSMUSP00000022828 Ensembl | MGI Sequence Detail 206 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:68979 Yawata M, et al., Nucleotide sequence analysis of the approximately 35-kb segment containing interferon-gamma-inducible mouse proteasome activator genes. Immunogenetics. 2001 Mar;53(2):119-29
  • Latest
    J:320079 Guna A, et al., The ER membrane protein complex is a transmembrane domain insertase. Science. 2018 Jan 26;359(6374):470-473
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory