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Allc Gene Detail
Summary
  • Symbol
    Allc
  • Name
    allantoicase
  • Synonyms
    1700012B22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2136971
    NCBI Gene: 94041
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:28603754-28632522 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 10.97 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    926 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2136971
 protein coding gene Chr12:28603754-28632527 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019641
 protein coding gene Chr12:26380230-26411873 (-)
A/J MGP_AJ_G0019608
 protein coding gene Chr12:25676542-25705268 (-)
AKR/J MGP_AKRJ_G0019579
 protein coding gene Chr12:26532695-26561815 (-)
BALB/cJ MGP_BALBcJ_G0019585
 protein coding gene Chr12:25924323-25947028 (-)
C3H/HeJ MGP_C3HHeJ_G0019389
 protein coding gene Chr12:26392344-26414430 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020032
 protein coding gene Chr12:27221661-27261683 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017657
 protein coding gene Chr12:25030225-25054179 (-)
CAST/EiJ MGP_CASTEiJ_G0018944
 protein coding gene Chr12:21356435-21383445 (-)
CBA/J MGP_CBAJ_G0019360
 protein coding gene Chr12:28196802-28225261 (-)
DBA/2J MGP_DBA2J_G0019474
 protein coding gene Chr12:25524441-25550069 (-)
FVB/NJ MGP_FVBNJ_G0019465
 protein coding gene Chr12:25328923-25358269 (-)
LP/J MGP_LPJ_G0019544
 protein coding gene Chr12:26468833-26500882 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019500
 protein coding gene Chr12:27823559-27853916 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020072
 protein coding gene Chr12:26050337-26078968 (-)
PWK/PhJ MGP_PWKPhJ_G0018711
 protein coding gene Chr12:20232850-20262595 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018499
 protein coding gene Chr12:20623272-20659040 (-)
WSB/EiJ MGP_WSBEiJ_G0018995
 protein coding gene Chr12:26249895-26273122 (-)



Homology
more
  • Human Ortholog
    ALLC, allantoicase
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ALLC, allantoicase
  • Synonyms
    ALC
  • Links
    NCBI Gene ID: 55821
    neXtProt AC: NX_Q8N6M5
    UniProt: Q8N6M5

  • Chr Location
    2p25.3; chr2:3645819-3702671 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Mice exhibit normal male fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    14
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020636 Ensembl Gene Model | MGI Sequence Detail 28769 C57BL/6J ±  kb
    transcript ENSMUST00000110917 Ensembl | MGI Sequence Detail 1384 Not Applicable  
    polypeptide ENSMUSP00000106542 Ensembl | MGI Sequence Detail 414 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      cDNA 14
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1923645
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 5
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:293870 Sun J, et al., CRISPR/Cas9-based genome editing in mice uncovers 13 testis- or epididymis-enriched genes individually dispensable for male reproduction. Biol Reprod. 2020 Aug 4;103(2):183-194
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory