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Mrpl16 Gene Detail
Summary
  • Symbol
    Mrpl16
  • Name
    mitochondrial ribosomal protein L16
  • Synonyms
    2310039D06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2137219
    NCBI Gene: 94063
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:11747779-11752320 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 8.52 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    182 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137219
 protein coding gene Chr19:11747755-11752324 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024885
 protein coding gene Chr19:9160391-9164920 (+)
A/J MGP_AJ_G0024859
 protein coding gene Chr19:8647656-8652192 (+)
AKR/J MGP_AKRJ_G0024834
 protein coding gene Chr19:8972212-8976742 (+)
BALB/cJ MGP_BALBcJ_G0024859
 protein coding gene Chr19:8649024-8653560 (+)
C3H/HeJ MGP_C3HHeJ_G0024625
 protein coding gene Chr19:8872104-8876633 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025307
 protein coding gene Chr19:9610787-9615316 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022733
 protein coding gene Chr19:9234451-9238959 (+)
CAST/EiJ MGP_CASTEiJ_G0024098
 protein coding gene Chr19:8464998-8469527 (+)
CBA/J MGP_CBAJ_G0024599
 protein coding gene Chr19:9677760-9682289 (+)
DBA/2J MGP_DBA2J_G0024726
 protein coding gene Chr19:8610736-8615265 (+)
FVB/NJ MGP_FVBNJ_G0024693
 protein coding gene Chr19:8642549-8647084 (+)
LP/J MGP_LPJ_G0024813
 protein coding gene Chr19:9162301-9166830 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024720
 protein coding gene Chr19:9588291-9592827 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025355
 protein coding gene Chr19:8956548-8961077 (+)
PWK/PhJ MGP_PWKPhJ_G0023842
 protein coding gene Chr19:8078373-8082903 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023648
 protein coding gene Chr19:8130800-8135366 (+)
WSB/EiJ MGP_WSBEiJ_G0024160
 protein coding gene Chr19:8806635-8811172 (+)



Homology
more
  • Human Ortholog
    MRPL16, mitochondrial ribosomal protein L16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MRPL16, mitochondrial ribosomal protein L16
  • Synonyms
    L16mt, MRP-L16, PNAS-111, uL16m
  • Links
    NCBI Gene ID: 54948
    neXtProt AC: NX_Q9NX20
    UniProt: Q9NX20

  • Chr Location
    11q12.1; chr11:59806140-59810778 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    13
  • cDNA Data
    69
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 94063 NCBI Gene Model | MGI Sequence Detail 4542 C57BL/6J ±  kb
transcript NM_025606 RefSeq | MGI Sequence Detail 1134 C57BL/6  
polypeptide Q99N93 UniProt | EBI | MGI Sequence Detail 251 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000010578 large ribosomal subunit protein uL16m
    (term hierarchy)
  • InterPro Domains
    IPR047873 Large ribosomal subunit protein uL16
    IPR000114 Large ribosomal subunit protein uL16, bacterial-type
    IPR016180 Large ribosomal subunit protein uL16 domain
    IPR036920 Large ribosomal subunit protein uL16 superfamily
Molecular
Reagents
less
  • All nucleic 70
    cDNA 69
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1913759
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:297050 Cheong A, et al., Expression analysis of mammalian mitochondrial ribosomal protein genes. Gene Expr Patterns. 2020 Sep 25;38:119147
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory