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Prrt4 Gene Detail
Summary
  • Symbol
    Prrt4
  • Name
    proline-rich transmembrane protein 4
  • Synonyms
    D330027H18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141677
    NCBI Gene: 101359
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:29169231-29179583 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 12.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    296 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141677
 protein coding gene Chr6:29169229-29179583 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030515
 protein coding gene Chr6:26935340-26947900 (-)
A/J MGP_AJ_G0030488
 protein coding gene Chr6:25801649-25811117 (-)
AKR/J MGP_AKRJ_G0030415
 protein coding gene Chr6:26650553-26660872 (-)
BALB/cJ MGP_BALBcJ_G0030498
 protein coding gene Chr6:25959825-25969150 (-)
C3H/HeJ MGP_C3HHeJ_G0030211
 protein coding gene Chr6:26654389-26664711 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030952
 protein coding gene Chr6:27727318-27737654 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028163
 protein coding gene Chr6:24010057-24019790 (-)
CAST/EiJ MGP_CASTEiJ_G0029613
 protein coding gene Chr6:26437158-26447198 (-)
CBA/J MGP_CBAJ_G0030189
 protein coding gene Chr6:28735518-28745872 (-)
DBA/2J MGP_DBA2J_G0030333
 protein coding gene Chr6:25746634-25757423 (-)
FVB/NJ MGP_FVBNJ_G0030287
 protein coding gene Chr6:25500234-25510891 (-)
LP/J MGP_LPJ_G0030420
 protein coding gene Chr6:27079188-27089469 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030323
 protein coding gene Chr6:31278159-31289521 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030982
 protein coding gene Chr6:26517331-26527299 (-)
PWK/PhJ MGP_PWKPhJ_G0029327
 protein coding gene Chr6:25280550-25290810 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029163
 protein coding gene Chr6:26241775-26252136 (-)
WSB/EiJ MGP_WSBEiJ_G0029689
 protein coding gene Chr6:26491655-26502632 (-)



Homology
more
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
  • Links
    NCBI Gene ID: 401399
    neXtProt AC: NX_C9JH25
    UniProt: C9JH25

  • Chr Location
    7q32.1; chr7:128350325-128361983 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079654 Ensembl Gene Model | MGI Sequence Detail 10353 C57BL/6J ±  kb
transcript ENSMUST00000159200 Ensembl | MGI Sequence Detail 3411 Not Applicable  
polypeptide ENSMUSP00000123751 Ensembl | MGI Sequence Detail 902 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory